HHsearch alignment for GI: 254780891 and conserved domain: COG2972
>COG2972 Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].
Probab=99.49 E-value=3.4e-12 Score=97.37 Aligned_cols=188 Identities=15% Similarity=0.075 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
Q ss_conf 96768799999774545422799999999999614430147898889999999986311001122320000000001344
Q gi|254780891|r 9 LSSMDLVALLCSRICHDIISPIGAIHNSLELLDEVGIEDEVMQLIRLSSMSAIIRLKFMRLAFGYTGSVDSLIGLGDIEQ 88 (215)
Q Consensus 9 ~~~~~laallas~IaHdlrtPL~~I~~~~elL~~~~~~~~~~~~i~~~~~~~~~l~~~~r~~~~~~~~~~~~~~~~~~~~ 88 (215)
T Consensus 253 ~~~~el~~lqsqi~pHfL~NtL~~I~~~~~~~~----~-------~~~~~~v~~l~~llR~~l~~~--~~~~~l~~E-~~ 318 (456)
T COG2972 253 QLEAELRALQSQINPHFLYNTLETIRMLAEEDD----P-------EEAAKVVKALSKLLRYSLSNL--DNIVTLEIE-LL 318 (456)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC----H-------HHHHHHHHHHHHHHHHHHHCC--CCCCCHHHH-HH
T ss_conf 999999997721261689999999999987357----9-------999999999999999750065--553419999-99
Q ss_pred HHHHHHH-----CCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHH----HHHCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 4443220-----12233211000000100-012344456766468765----3200111112355772047999878984
Q gi|254780891|r 89 VIEDFIA-----VDKRVQVSWTGEKIDLS-RERAKILLNLFMVAHASL----PRGGKVTISVQDSKNENIFSLKINGNLA 158 (215)
Q Consensus 89 ~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~qvl~NLi~NA~~a~----~~gg~I~i~~~~~~~~~~i~V~D~G~Gi 158 (215)
T Consensus 319 ~~~kyl~iq~~r~~~~le~~~~i~~~~~~l~~p~l~lqpLvENAi~hgi~~~~~~~~I~i~~~~~~~~i~i~i~Dng~g~ 398 (456)
T COG2972 319 LIEKYLEIQKLRIGDRLEVPLPIDEELEPLIDPKLVLQPLVENAIEHGIEPKRPGGSIAISAKKQDDVIQISISDNGPGI 398 (456)
T ss_pred HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCCC
T ss_conf 99999999981998799997203753320232788988879999998620469995799999405879999977699995
Q ss_pred CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCE--EEEEEECCCCEEEEEEEEC
Q ss_conf 40245887405454578998720499999999970987--9999877992699999419
Q gi|254780891|r 159 RFPEKFTQIVDGNVESTIDSHDIQFYYVILLAHENKIR--LLPEIIDDHNVVLSALLEK 215 (215)
Q Consensus 159 ~~~e~~~~~~~~~~~~~~~g~GlGl~~~~~i~~~~gG~--i~v~~~~~~g~~f~~~l~~ 215 (215)
T Consensus 399 ~-~~~~~~~~~~~~~r----~giGL~Nv~~rl~~~~g~~~~~i~s~~~~gt~v~~~~~~ 452 (456)
T COG2972 399 D-EEKLEGLSTKGENR----SGIGLSNVKERLKLYFGEPGLSIDSQPGKGTFVQIIIPK 452 (456)
T ss_pred C-HHHHHHHHHCCCCC----CCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEH
T ss_conf 8-78886676415777----773588799999871897621799964895899999863