HHsearch alignment for GI: 254780891 and conserved domain: COG4585

>COG4585 Signal transduction histidine kinase [Signal transduction mechanisms].
Probab=99.37  E-value=5.1e-11  Score=89.86  Aligned_cols=89  Identities=9%  Similarity=-0.009  Sum_probs=76.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             00123444567664687653200111112355772047999878984402458874054545789987204999999999
Q gi|254780891|r  112 SRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIVDGNVESTIDSHDIQFYYVILLAH  191 (215)
Q Consensus       112 ~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~~~~~~~g~GlGl~~~~~i~~  191 (215)
T Consensus       277 e~~l~rivQEaltN~~rHa~-A~~v~V~l~~~~~~l~l~V~DnG~Gf~~~~~-------------~-~~~GL~~mreRv~  341 (365)
T COG4585         277 EDALFRIVQEALTNAIRHAQ-ATEVRVTLERTDDELRLEVIDNGVGFDPDKE-------------G-GGFGLLGMRERVE  341 (365)
T ss_pred             HHHHHHHHHHHHHHHHHCCC-CCEEEEEEEECCCEEEEEEEECCCCCCCCCC-------------C-CCCCHHHHHHHHH
T ss_conf             99999999999989987578-4569999998298899999989978897645-------------7-7766766999999


Q ss_pred             HCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf             709879999877992699999419
Q gi|254780891|r  192 ENKIRLLPEIIDDHNVVLSALLEK  215 (215)
Q Consensus       192 ~~gG~i~v~~~~~~g~~f~~~l~~  215 (215)
T Consensus       342 ~lgG~l~i~S~~g~Gt~i~i~lPl  365 (365)
T COG4585         342 ALGGTLTIDSAPGQGTTVTITLPL  365 (365)
T ss_pred             HCCCEEEEEECCCCCEEEEEEEEC
T ss_conf             869989998559997799999509