HHsearch alignment for GI: 254780891 and conserved domain: COG4585
>COG4585 Signal transduction histidine kinase [Signal transduction mechanisms].
Probab=99.37 E-value=5.1e-11 Score=89.86 Aligned_cols=89 Identities=9% Similarity=-0.009 Sum_probs=76.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 00123444567664687653200111112355772047999878984402458874054545789987204999999999
Q gi|254780891|r 112 SRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIVDGNVESTIDSHDIQFYYVILLAH 191 (215)
Q Consensus 112 ~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~~~~~~~g~GlGl~~~~~i~~ 191 (215)
T Consensus 277 e~~l~rivQEaltN~~rHa~-A~~v~V~l~~~~~~l~l~V~DnG~Gf~~~~~-------------~-~~~GL~~mreRv~ 341 (365)
T COG4585 277 EDALFRIVQEALTNAIRHAQ-ATEVRVTLERTDDELRLEVIDNGVGFDPDKE-------------G-GGFGLLGMRERVE 341 (365)
T ss_pred HHHHHHHHHHHHHHHHHCCC-CCEEEEEEEECCCEEEEEEEECCCCCCCCCC-------------C-CCCCHHHHHHHHH
T ss_conf 99999999999989987578-4569999998298899999989978897645-------------7-7766766999999
Q ss_pred HCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf 709879999877992699999419
Q gi|254780891|r 192 ENKIRLLPEIIDDHNVVLSALLEK 215 (215)
Q Consensus 192 ~~gG~i~v~~~~~~g~~f~~~l~~ 215 (215)
T Consensus 342 ~lgG~l~i~S~~g~Gt~i~i~lPl 365 (365)
T COG4585 342 ALGGTLTIDSAPGQGTTVTITLPL 365 (365)
T ss_pred HCCCEEEEEECCCCCEEEEEEEEC
T ss_conf 869989998559997799999509