HHsearch alignment for GI: 254780891 and conserved domain: PRK04069

>PRK04069 serine-protein kinase RsbW; Provisional.
Probab=98.32  E-value=3.5e-06  Score=59.14  Aligned_cols=88  Identities=11%  Similarity=0.065  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHHHH---HHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCC----CCCCCCCHHHHHHHHHH
Q ss_conf             44567664687653---200111112355772047999878984402458874054545----78998720499999999
Q gi|254780891|r  118 ILLNLFMVAHASLP---RGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIVDGNVE----STIDSHDIQFYYVILLA  190 (215)
Q Consensus       118 vl~NLi~NA~~a~~---~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~~~----~~~~g~GlGl~~~~~i~  190 (215)
T Consensus        46 AV~EA~tNaI~Hay~~~~~~~i~i~~~~~~~~l~i~V~D~G~gfD-~~~~~~~~~P~~~~~~l~~~~~gGlGl~lI~~lm  124 (158)
T PRK04069         46 AVSEACTNAVQHAYKEEEVGEINIRFEIYEDRLEIVVADNGDSFD-YETTKSKIGPYDPSEPIDDLREGGLGLFLIETLM  124 (158)
T ss_pred             HHHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEEEEECCCCCC-HHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHC
T ss_conf             999999999997515699947999999959999999999174879-5674324588888886111367874099999752


Q ss_pred             HHCCCEEEEEEECCCCEEEEEE
Q ss_conf             9709879999877992699999
Q gi|254780891|r  191 HENKIRLLPEIIDDHNVVLSAL  212 (215)
Q Consensus       191 ~~~gG~i~v~~~~~~g~~f~~~  212 (215)
T Consensus       125 De----V~~~~--~~Gt~v~m~  140 (158)
T PRK04069        125 DD----VTVYK--DSGVTVSMT  140 (158)
T ss_pred             CE----EEEEE--CCCEEEEEE
T ss_conf             55----89990--898299999