HHsearch alignment for GI: 254780891 and conserved domain: PRK10815

>PRK10815 sensor protein PhoQ; Provisional.
Probab=100.00  E-value=7.5e-34  Score=234.90  Aligned_cols=195  Identities=10%  Similarity=0.058  Sum_probs=134.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-HHHH----HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC----CHHHH
Q ss_conf             9977454542279999999999961443014-7898----8899999999863110011223200000000----01344
Q gi|254780891|r   18 LCSRICHDIISPIGAIHNSLELLDEVGIEDE-VMQL----IRLSSMSAIIRLKFMRLAFGYTGSVDSLIGL----GDIEQ   88 (215)
Q Consensus        18 las~IaHdlrtPL~~I~~~~elL~~~~~~~~-~~~~----i~~~~~~~~~l~~~~r~~~~~~~~~~~~~~~----~~~~~   88 (215)
T Consensus       269 F~adaSHELRTPLa~l~~~le~L~~~~~~~~~~~~~~le~i~Rl~~li~~lL~~a~~~~~~~~~~~e~~~l~~ll~~l~~  348 (484)
T PRK10815        269 TLTDLTHSLKTPLAVLQSTLRSLRTEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGEGTLLSRELHPVAPLLDNLTS  348 (484)
T ss_pred             HHHCCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             98544364345699999999997469988789999999999999999999999987038986302555669999999999


Q ss_pred             HHHHH-HHCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHH
Q ss_conf             44432-201223321100000--010001234445676646876532001111123557720479998789844024588
Q gi|254780891|r   89 VIEDF-IAVDKRVQVSWTGEK--IDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFPEKFT  165 (215)
Q Consensus        89 ~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~  165 (215)
T Consensus       349 ~l~~~~~~k~i~l~~~~~~~~~~~gd~~~l~~~l~NLldNAikys~~~--v~I~~~~~~~~~~I~V~D~GpGIp-~e~~~  425 (484)
T PRK10815        349 ALNKVYQRKGVNISLDISPEISFVGEQNDFMEVMGNVLDNACKYCLEF--VEISARQTDEHLHIVVEDDGPGIP-ESKRE  425 (484)
T ss_pred             HHHHHHHHCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHCCCC--EEEEEEEECCEEEEEEEECCCCCC-HHHHH
T ss_conf             999999964977999648760795578999999999999999728886--799999969999999997399999-89998


Q ss_pred             HHHCCCCCCC--CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf             7405454578--9987204999999999709879999877992699999419
Q gi|254780891|r  166 QIVDGNVEST--IDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLEK  215 (215)
Q Consensus       166 ~~~~~~~~~~--~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~~  215 (215)
T Consensus       426 ~IFeRF~R~d~~r~GsGLGLaIvk~Iv~~hgG~I~l~~s~~gG~~f~I~F~~  477 (484)
T PRK10815        426 LIFDRGQRVDTLRPGQGVGLAVAREITEQYEGKIVASESPLGGARMEVIFGR  477 (484)
T ss_pred             HHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECC
T ss_conf             6246887799999985767999999999889989999569992489999738