HHsearch alignment for GI: 254780891 and conserved domain: PRK11091
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional.
Probab=100.00 E-value=2.4e-35 Score=244.41 Aligned_cols=197 Identities=14% Similarity=0.124 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH---HHHHHHHHHHHH----HHHHHHHHCCCCCCCCCCCCCCCCHHHH
Q ss_conf 999977454542279999999999961443014---789888999999----9986311001122320000000001344
Q gi|254780891|r 16 ALLCSRICHDIISPIGAIHNSLELLDEVGIEDE---VMQLIRLSSMSA----IIRLKFMRLAFGYTGSVDSLIGLGDIEQ 88 (215)
Q Consensus 16 allas~IaHdlrtPL~~I~~~~elL~~~~~~~~---~~~~i~~~~~~~----~~l~~~~r~~~~~~~~~~~~~~~~~~~~ 88 (215)
T Consensus 284 S~FLAnMSHEIRTPLNgIlG~seLL~~t~L~~eQre~l~~I~~S~~~Ll~LINDILD~SKIEaGkl~l~~~~fdl~~ll~ 363 (779)
T PRK11091 284 TTFISTISHELRTPLNGIVGLSRMLLDTELTAEQEKYLKTIHVSAITLGNIFNDIIDMDKMDRRKLQLDNQPVDFTDFLA 363 (779)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHH
T ss_conf 99998726875653999999999980799999999999999999999999999999999996699678877675999999
Q ss_pred HHHHHH-----HCCCCCCCCCCCC----CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCEEEEEEECCCCC
Q ss_conf 444322-----0122332110000----001000123444567664687653200111112355-772047999878984
Q gi|254780891|r 89 VIEDFI-----AVDKRVQVSWTGE----KIDLSRERAKILLNLFMVAHASLPRGGKVTISVQDS-KNENIFSLKINGNLA 158 (215)
Q Consensus 89 ~~~~~~-----~~~~~~~~~~~~~----~~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~-~~~~~i~V~D~G~Gi 158 (215)
T Consensus 364 ~v~~~~~~~A~~Kgl~l~~~~~~~lP~~v~gD~~RLrQIL~NLlsNAIKFT~~G-~V~l~v~~~~~~~l~f~V~DTGiGI 442 (779)
T PRK11091 364 DLENLSGLQAEQKGLRFDLEPLLPLPHKVITDGTRLRQILWNLISNAVKFTQQG-QVTVRVRYEDGDMLHFEVEDSGIGI 442 (779)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCC-CEEEEEEECCCCEEEEEEEECCCCC
T ss_conf 999999999997498899997899986286389999999999999997738999-7799999827988999999579999
Q ss_pred CCHHHHHHHHCCCCC------CC-CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEE
Q ss_conf 402458874054545------78-998720499999999970987999987799269999941
Q gi|254780891|r 159 RFPEKFTQIVDGNVE------ST-IDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLE 214 (215)
Q Consensus 159 ~~~e~~~~~~~~~~~------~~-~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~ 214 (215)
T Consensus 443 ~-~e~l~~IF~~F~Q~~~s~~~r~~~GTGLGLaI~k~LvelMGG~I~V~S~~G~GStFt~~Lp 504 (779)
T PRK11091 443 P-EDELDKIFAMYYQVKDSHGGKPATGTGIGLAVSRRLAQNMGGDITVTSEEGKGSTFTLTIH 504 (779)
T ss_pred C-HHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEE
T ss_conf 9-9999987057560667877767788760799999999984997999955998717999997