>TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase; InterPro: IPR014265 Proteins in this entry are putative periplasmic sensor signal transduction histidine kinases. They all contain a GAF domain that is present in phytochromes and cGMP-specific phosphodiesterases, and which has been experimentally proven to be involved in protein:protein interactions. They also contain a C-terminal histidine kinase domain, which is composed of a dimerisation sub-domain and an ATP/ADP-binding phosphotransfer, or catalytic, sub-domain. The proteins in this entry are found strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria, where members of IPR014264 from INTERPRO and IPR014266 from INTERPRO also occur..

Probab=100.00 E-value=6.3e-34 Score=235.40 Aligned_cols=205 Identities=14% Similarity=0.117 Sum_probs=165.1 Q ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC Q ss_conf 967687999--9977454542279999999999961----4430147898889999999986311001122320000000 Q gi|254780891|r 9 LSSMDLVAL--LCSRICHDIISPIGAIHNSLELLDE----VGIEDEVMQLIRLSSMSAIIRLKFMRLAFGYTGSVDSLIG 82 (215) Q Consensus 9 ~~~~~laal--las~IaHdlrtPL~~I~~~~elL~~----~~~~~~~~~~i~~~~~~~~~l~~~~r~~~~~~~~~~~~~~ 82 (215) T Consensus 478 ~~arqF~~FnR~SaFvVHDLKNLvaQLSL~l~NA~~Hk~NPeFq~DmL~Tv~~~v~RM~~ll~qLr~~-~~p~~~~~~~~ 556 (696) T TIGR02916 478 AEARQFEAFNRMSAFVVHDLKNLVAQLSLLLRNAERHKDNPEFQDDMLETVESAVNRMKKLLAQLREK-GLPEEEKKTVD 556 (696) T ss_pred HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHEEH T ss_conf 98888875188034211025899999999999887417896689999998999999999999997306-89740564103 Q ss_pred CCHHHHHH-HHHHHCCCCCCCCC---C--CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-CCEEEEEEECC Q ss_conf 00134444-43220122332110---0--000010001234445676646876532001111123557-72047999878 Q gi|254780891|r 83 LGDIEQVI-EDFIAVDKRVQVSW---T--GEKIDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSK-NENIFSLKING 155 (215) Q Consensus 83 ~~~~~~~~-~~~~~~~~~~~~~~---~--~~~~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~-~~~~i~V~D~G 155 (215) T Consensus 557 l~~L~~~~~~~k~~q~p~~e~~~~~~~~rl~~~a~~erl~rV~gHL~QNAlEAT~~~G~V~~~~~~~~~~~a~i~i~D~G 636 (696) T TIGR02916 557 LVDLLRRVIASKRAQQPRPEVSIEDTDFRLSVRADRERLERVLGHLVQNALEATPEEGRVKIRVERECGGAAVIEIEDSG 636 (696) T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEECC T ss_conf 89999999999863189448997175417888752888999999999988860499962899987418882279998657 Q ss_pred CCCCCHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEE Q ss_conf 984402458874054545789-98720499999999970987999987799269999941 Q gi|254780891|r 156 NLARFPEKFTQIVDGNVESTI-DSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLE 214 (215) Q Consensus 156 ~Gi~~~e~~~~~~~~~~~~~~-~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~ 214 (215) T Consensus 637 ~GM~~~FiR~rLF~PF~tTK~~aGMGIG~YE~~~yv~e~GG~i~V~S~pG~Gt~ftl~LP 696 (696) T TIGR02916 637 CGMSEAFIRERLFKPFDTTKGNAGMGIGVYECRQYVEELGGRIEVESTPGKGTIFTLVLP 696 (696) T ss_pred CCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEECC T ss_conf 899858998407899754456678720189999999983890588863588548887449

HHsearch alignment for GI: 254780891 and conserved domain: TIGR02916