HHsearch alignment for GI: 254780891 and conserved domain: TIGR02966
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR; InterPro: IPR014310 Members of this protein are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter found in most Proteobacteria, and related proteins from Gram-positive organisms are excluded. The phoR gene usually is adjacent to the response regulator phoB gene (IPR011879 from INTERPRO)..
Probab=100.00 E-value=3.2e-42 Score=288.03 Aligned_cols=195 Identities=16% Similarity=0.196 Sum_probs=146.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC-C-----CHHHHHHHHHHHHHHHHHHH----HHHCCCCCCCCCCCCCCCCHHH
Q ss_conf 997745454227999999999996144-3-----01478988899999999863----1100112232000000000134
Q gi|254780891|r 18 LCSRICHDIISPIGAIHNSLELLDEVG-I-----EDEVMQLIRLSSMSAIIRLK----FMRLAFGYTGSVDSLIGLGDIE 87 (215)
Q Consensus 18 las~IaHdlrtPL~~I~~~~elL~~~~-~-----~~~~~~~i~~~~~~~~~l~~----~~r~~~~~~~~~~~~~~~~~~~ 87 (215)
T Consensus 121 FVANVSHELRTPLTVl~GyLEtl~~~~~~~~~~~~~~~l~~M~~Q~~RM~~LV~dLL~LSrlE~~~~~~~~~~V~~~~ll 200 (339)
T TIGR02966 121 FVANVSHELRTPLTVLRGYLETLEDGPVDEDPEEWNRALELMQEQSQRMQSLVEDLLTLSRLESAANPPEDEPVDVPALL 200 (339)
T ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
T ss_conf 11445211145403556899975523677880889999999999999999999999888764157888455656879999
Q ss_pred HHHHHH---HHCCCCCCCCCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCC
Q ss_conf 444432---2012233211000-----00010001234445676646876532001111123557720479998789844
Q gi|254780891|r 88 QVIEDF---IAVDKRVQVSWTG-----EKIDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLAR 159 (215)
Q Consensus 88 ~~~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~ 159 (215)
T Consensus 201 ~~l~~~A~~ls~~~~h~I~~~~pd~~~~~~G~e~~L~SAf~NLv~NAikYTp~gg~I~v~W~~~~~ga~fsV~DtG~GI~ 280 (339)
T TIGR02966 201 DHLRDEAEALSQGKQHQITFEIPDAGLDLLGNEDELRSAFSNLVSNAIKYTPEGGTITVRWRRDEGGAEFSVTDTGIGIA 280 (339)
T ss_pred HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEEECCCCCC
T ss_conf 99999999997118838999823888530144777999999998875300899887999999857803999987798987
Q ss_pred CHHHH----HHHHCC--CCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEE
Q ss_conf 02458----874054--5457899872049999999997098799998779926999994
Q gi|254780891|r 160 FPEKF----TQIVDG--NVESTIDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALL 213 (215)
Q Consensus 160 ~~e~~----~~~~~~--~~~~~~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l 213 (215)
T Consensus 281 -~eHipRLTERFYRVD~~RSR~tGGTGLGLAIVKH~L~rH~a~L~I~Se~G~GS~F~~~F 339 (339)
T TIGR02966 281 -PEHIPRLTERFYRVDKSRSRDTGGTGLGLAIVKHVLSRHHARLEIESELGKGSTFSFIF 339 (339)
T ss_pred -HHHCCCCCCEEEEECHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEC
T ss_conf -31377542001230533415788984336899998741487899998853760688759