HHsearch alignment for GI: 254780891 and conserved domain: cd00075
>cd00075 HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins.
Probab=99.84 E-value=1.5e-20 Score=150.38 Aligned_cols=98 Identities=21% Similarity=0.213 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHHHH-HCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCC----CCCCCCCCCHHHHHHHHH
Q ss_conf 234445676646876532-001111123557720479998789844024588740545----457899872049999999
Q gi|254780891|r 115 RAKILLNLFMVAHASLPR-GGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIVDGN----VESTIDSHDIQFYYVILL 189 (215)
Q Consensus 115 ~~qvl~NLi~NA~~a~~~-gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~----~~~~~~g~GlGl~~~~~i 189 (215)
T Consensus 1 l~~vl~nLl~NAik~~~~~~~~I~i~~~~~~~~~~i~V~D~G~Gi~-~~~~~~if~~f~~~~~~~~~~g~GlGL~i~~~i 79 (103)
T cd00075 1 LQQVLLNLLSNAIKHTPEGGGRITISVERDGDHLEIRVEDNGPGIP-EEDLERIFERFSDGSRSRKGGGTGLGLSIVKKL 79 (103)
T ss_pred CHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEEECCCCCC-HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 9699999999999867899948999999839999999997799408-899976069750178887789865059999999
Q ss_pred HHHCCCEEEEEEECCCCEEEEEEE
Q ss_conf 997098799998779926999994
Q gi|254780891|r 190 AHENKIRLLPEIIDDHNVVLSALL 213 (215)
Q Consensus 190 ~~~~gG~i~v~~~~~~g~~f~~~l 213 (215)
T Consensus 80 ~~~~~G~i~i~s~~~~Gt~~~i~l 103 (103)
T cd00075 80 VELHGGRIEVESEPGGGTTFTITL 103 (103)
T ss_pred HHHCCCEEEEEECCCCCEEEEEEC
T ss_conf 998899899996599919999989