HHsearch alignment for GI: 254780891 and conserved domain: pfam10090
>pfam10090 DUF2328 Uncharacterized protein conserved in bacteria (DUF2328). Members of this family of hypothetical bacterial proteins have no known function.
Probab=99.83 E-value=1.4e-19 Score=144.26 Aligned_cols=177 Identities=37% Similarity=0.591 Sum_probs=156.8
Q ss_pred HHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999999614430--1478988899999999863110011223200000000013444443220122332110000
Q gi|254780891|r 30 IGAIHNSLELLDEVGIE--DEVMQLIRLSSMSAIIRLKFMRLAFGYTGSVDSLIGLGDIEQVIEDFIAVDKRVQVSWTGE 107 (215)
Q Consensus 30 L~~I~~~~elL~~~~~~--~~~~~~i~~~~~~~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (215)
T Consensus 1 vGAI~NGLELL~~~~~~~~~~~m~LI~~Sa~~A~aRl~F~RlAfGaag-~~~~i~~~e~~~~~~~~~~~-~r~~l~W~~~ 78 (181)
T pfam10090 1 VGAIVNGLELLDDEGDPEMGPEMALIRESARNASARLRFFRLAFGAAG-AGQQIDLAEAKSVLEGYLAG-GRITLDWQLE 78 (181)
T ss_pred CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHHC-CCEEEEECCC
T ss_conf 931255588870789864168999999999999999999999808468-88856999999999999838-8538983587
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCC-CCCCCCCCCHHHHHH
Q ss_conf 0010001234445676646876532001111123557720479998789844024588740545-457899872049999
Q gi|254780891|r 108 KIDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIVDGN-VESTIDSHDIQFYYV 186 (215)
Q Consensus 108 ~~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~-~~~~~~g~GlGl~~~ 186 (215)
T Consensus 79 ~~~~~k~~vklllnl~l~~~~AlprGG~i~V~~-~~~~~~~~~v~a~g~r~~~~~~~~~~L~g~~~~~~l~~~~VQ~~~l 157 (181)
T pfam10090 79 RDLLPKPEVKLLLNLLLIAEDALPRGGEIDVGE-GSDGAGGWRVTAEGERLRIDPDLWAALAGGAPEEELDARNVQFYLL 157 (181)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE-ECCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf 454887999999999999997547787789998-4178975999997046789978999856999877899876499999
Q ss_pred HHHHHHCCCEEEEEEECCCCEEEE
Q ss_conf 999997098799998779926999
Q gi|254780891|r 187 ILLAHENKIRLLPEIIDDHNVVLS 210 (215)
Q Consensus 187 ~~i~~~~gG~i~v~~~~~~g~~f~ 210 (215)
T Consensus 158 ~~la~~~G~~l~~~~~~~-~i~l~ 180 (181)
T pfam10090 158 PLLAREAGGTLSYEITED-GIVLS 180 (181)
T ss_pred HHHHHHCCCCEEEEECCC-EEEEE
T ss_conf 999998699117886497-79981