HHsearch alignment for GI: 254780891 and conserved domain: pfam10090

>pfam10090 DUF2328 Uncharacterized protein conserved in bacteria (DUF2328). Members of this family of hypothetical bacterial proteins have no known function.
Probab=99.83  E-value=1.4e-19  Score=144.26  Aligned_cols=177  Identities=37%  Similarity=0.591  Sum_probs=156.8

Q ss_pred             HHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             99999999999614430--1478988899999999863110011223200000000013444443220122332110000
Q gi|254780891|r   30 IGAIHNSLELLDEVGIE--DEVMQLIRLSSMSAIIRLKFMRLAFGYTGSVDSLIGLGDIEQVIEDFIAVDKRVQVSWTGE  107 (215)
Q Consensus        30 L~~I~~~~elL~~~~~~--~~~~~~i~~~~~~~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (215)
T Consensus         1 vGAI~NGLELL~~~~~~~~~~~m~LI~~Sa~~A~aRl~F~RlAfGaag-~~~~i~~~e~~~~~~~~~~~-~r~~l~W~~~   78 (181)
T pfam10090         1 VGAIVNGLELLDDEGDPEMGPEMALIRESARNASARLRFFRLAFGAAG-AGQQIDLAEAKSVLEGYLAG-GRITLDWQLE   78 (181)
T ss_pred             CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHHC-CCEEEEECCC
T ss_conf             931255588870789864168999999999999999999999808468-88856999999999999838-8538983587


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCC-CCCCCCCCCHHHHHH
Q ss_conf             0010001234445676646876532001111123557720479998789844024588740545-457899872049999
Q gi|254780891|r  108 KIDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIVDGN-VESTIDSHDIQFYYV  186 (215)
Q Consensus       108 ~~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~-~~~~~~g~GlGl~~~  186 (215)
T Consensus        79 ~~~~~k~~vklllnl~l~~~~AlprGG~i~V~~-~~~~~~~~~v~a~g~r~~~~~~~~~~L~g~~~~~~l~~~~VQ~~~l  157 (181)
T pfam10090        79 RDLLPKPEVKLLLNLLLIAEDALPRGGEIDVGE-GSDGAGGWRVTAEGERLRIDPDLWAALAGGAPEEELDARNVQFYLL  157 (181)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE-ECCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf             454887999999999999997547787789998-4178975999997046789978999856999877899876499999


Q ss_pred             HHHHHHCCCEEEEEEECCCCEEEE
Q ss_conf             999997098799998779926999
Q gi|254780891|r  187 ILLAHENKIRLLPEIIDDHNVVLS  210 (215)
Q Consensus       187 ~~i~~~~gG~i~v~~~~~~g~~f~  210 (215)
T Consensus       158 ~~la~~~G~~l~~~~~~~-~i~l~  180 (181)
T pfam10090       158 PLLAREAGGTLSYEITED-GIVLS  180 (181)
T ss_pred             HHHHHHCCCCEEEEECCC-EEEEE
T ss_conf             999998699117886497-79981