HHsearch alignment of GI: 254780891 and MMDB domain: 1mu5_A_1-229

>1mu5_A (A:1-229) Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae}
Probab=99.85  E-value=3.9e-21  Score=153.75  Aligned_cols=105  Identities=10%  Similarity=-0.009  Sum_probs=89.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC------CCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCC-----C--
Q ss_conf             01000123444567664687653200111112------3557720479998789844024588740545457-----8--
Q gi|254780891|r  109 IDLSRERAKILLNLFMVAHASLPRGGKVTISV------QDSKNENIFSLKINGNLARFPEKFTQIVDGNVES-----T--  175 (215)
Q Consensus       109 ~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~------~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~~~~-----~--  175 (215)
                      ..++.++.|++.||+.||+||++.||.+.+..      ...+..+.|+|+|+|+||+ ++...++|++|+..     +  
T Consensus        27 ~~D~~rl~qIl~NLl~NAiKft~~g~~~~~~~~~~~~~~~~~~~l~i~V~DtG~GI~-~e~~~~iF~~f~~~~~~~~~~~  105 (229)
T 1mu5_A           27 PNPARALYQTVRELIENSLDATDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIP-PQEVPNAFGRVLYSSKYVNRQT  105 (229)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHTTGGGTCCCEEEEEEEEEETTTTEEEEEEECCSCCCC-GGGHHHHHHCCCCC-CCCCSCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCC-HHHHHHHHHHHCCCCCCCCCCC
T ss_conf             870118999999999999975775598771699999804899679999997589989-8999999876640676564135


Q ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEE
Q ss_conf             998720499999999970987999987799269999941
Q gi|254780891|r  176 IDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLE  214 (215)
Q Consensus       176 ~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~  214 (215)
                      ..|+||||++|+.+++.|||.+.+.|+.+++++|....+
T Consensus       106 ~~G~GLGL~i~~~lv~~~~G~i~~~s~~~~~~~~~~~~~  144 (229)
T 1mu5_A          106 RGMYGLGVKAAVLYSQMHQDKPIEIETSPVNSKRIYTFK  144 (229)
T ss_dssp             SCSCTTTHHHHHHHHHHHCCCCEEEEEECTTCSEEEEEE
T ss_pred             CCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEE
T ss_conf             884440699999999973795499999628997269987