HHsearch alignment of GI: 254780891 and MMDB domain: 3fv5_A_
>3fv5_A (A:) DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A*
Probab=96.16 E-value=0.037 Score=33.21 Aligned_cols=90 Identities=11% Similarity=0.097 Sum_probs=56.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCCCCCCEEEEEEECCCCCCCH----------HH-HHHHHCCC---
Q ss_conf 00100012344456766468765320--0111112355772047999878984402----------45-88740545---
Q gi|254780891|r 108 KIDLSRERAKILLNLFMVAHASLPRG--GKVTISVQDSKNENIFSLKINGNLARFP----------EK-FTQIVDGN--- 171 (215)
Q Consensus 108 ~~~~~~~~~qvl~NLi~NA~~a~~~g--g~I~i~~~~~~~~~~i~V~D~G~Gi~~~----------e~-~~~~~~~~--- 171 (215)
...-...+.+++.-++.||++..-.+ ..|.|....++. ++|.|+|.||+.. |. +..+..+.
T Consensus 11 myiGs~gl~~l~~Eii~NavDe~~~~~~~~i~v~~~~dg~---vsV~d~GrgiPv~~~~~~~~~~~E~v~t~l~ag~kfd 87 (201)
T 3fv5_A 11 MYTDTTRPNHLGQEVIDNSVDEALAGHAKRVDVILHADQS---LEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFS 87 (201)
T ss_dssp GTSCTTSTHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSC---EEEEECSSCCCCSBCTTCSSBHHHHHHHCC-------
T ss_pred CEECCCCCCEEEEEEEECCHHHHHCCCCCEEEEEEECCCC---EEEEECCCCEEEEECCCCCCCEEEEEEEEEECCCCCC
T ss_conf 2689988770786888813548754898379999918980---9999978964685867789714599999970357678
Q ss_pred ---CCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECC
Q ss_conf ---457899872049999999997098799998779
Q gi|254780891|r 172 ---VESTIDSHDIQFYYVILLAHENKIRLLPEIIDD 204 (215)
Q Consensus 172 ---~~~~~~g~GlGl~~~~~i~~~~gG~i~v~~~~~ 204 (215)
+....+.+|+|+.++..+. -.+.|+...+
T Consensus 88 ~~~~~~sgG~~GvG~svvNalS----~~~~V~v~r~ 119 (201)
T 3fv5_A 88 NKNYQFSGGLHGVGISVVNALS----KRVEVNVRRD 119 (201)
T ss_dssp --------------CHHHHHTE----EEEEEEEEET
T ss_pred CCCCCCCCCCCCCCCEEEEEEC----CCEEEEEECC
T ss_conf 8764113775760523447651----6169999418