HHsearch results for GI: 254780891 and protein with PDBid: 1b3q_A

>1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi- domains protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A*
Probab=99.88  E-value=2.6e-22  Score=160.27  Aligned_cols=187  Identities=12%  Similarity=0.075  Sum_probs=119.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH-CCCC
Q ss_conf             745454227999999999996144301478988899999999863110011223200000000013444443220-1223
Q gi|254780891|r   21 RICHDIISPIGAIHNSLELLDEVGIEDEVMQLIRLSSMSAIIRLKFMRLAFGYTGSVDSLIGLGDIEQVIEDFIA-VDKR   99 (215)
Q Consensus        21 ~IaHdlrtPL~~I~~~~elL~~~~~~~~~~~~i~~~~~~~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   99 (215)
                      +++||+.++.+.+..   .+++. .    .+.+.+...++.++.+.++.........+.......+...+..... ..+.
T Consensus        16 n~~gEL~~~~~~l~~---~~~~~-~----~~~l~~~~~~l~~l~~~L~~~~~~~r~~~l~~~~~~~~~~v~~~a~~~~~~   87 (379)
T 1b3q_A           16 DLMGELVIARSRILE---TLKKY-N----IKELDESLSHLSRITLDLQNVVMKIRMVPISFVFNRFPRMVRDLAKKMNKE   87 (379)
T ss_dssp             HHHHHHHHHHHHHHH---TTSSC-C----CHHHHHHHHHHHHHHHHHHHHHHHHHEEETHHHHTTHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHH---HHHHH-H----HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCE
T ss_conf             999879998988899---98876-7----999999999999999999998757250119999999999999999971996


Q ss_pred             CCCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHH------------CCCCCCCCCCCCCEEEEEEECCCCCCC---
Q ss_conf             3211000000----100012344456766468765320------------011111235577204799987898440---
Q gi|254780891|r  100 VQVSWTGEKI----DLSRERAKILLNLFMVAHASLPRG------------GKVTISVQDSKNENIFSLKINGNLARF---  160 (215)
Q Consensus       100 ~~~~~~~~~~----~~~~~~~qvl~NLi~NA~~a~~~g------------g~I~i~~~~~~~~~~i~V~D~G~Gi~~---  160 (215)
                      +++....+..    .....+.+++.||+.||++|++.+            |.+.+.+...++.+.+.++|+|.|+.+   
T Consensus        88 v~l~~~~~~~~~~~~~~~~l~~~l~~Ll~Na~~~~~e~~~~r~~~~~~~~~~i~~~~~~~~~~i~i~~~d~g~g~~~~~~  167 (379)
T 1b3q_A           88 VNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKI  167 (379)
T ss_dssp             EEEEEECTTCEEEHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHTTCCSSEEEEEEEEEETTEEEEEEEECSCCCCHHHH
T ss_pred             EEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEEEECCCCCCCCCC
T ss_conf             99997588732560029999999999987777643478628988640355530379997498799999406877664344


Q ss_pred             --------------------HHHHHHHHCCCCCCC-----CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf             --------------------245887405454578-----9987204999999999709879999877992699999419
Q gi|254780891|r  161 --------------------PEKFTQIVDGNVEST-----IDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLEK  215 (215)
Q Consensus       161 --------------------~e~~~~~~~~~~~~~-----~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~~  215 (215)
                                          ++.++.+|.++++++     .+|+||||++|+.++++|||+|+++|.+|+||+|+++||.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~s~~~~~~~~~G~GLGL~ivk~ive~hgG~I~V~S~~G~GTtF~i~lP~  247 (379)
T 1b3q_A          168 IRKAIEKGLIDESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVESLNGSMGIESEKDKGTKVTIRLPL  247 (379)
T ss_dssp             HHHHHHSSSCCSTTTTTSCTHHHHSGGGSTTCC-----------CCCSHHHHHHHHHTTCEEEEEEETTTEEEEEEEEES
T ss_pred             CEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCEEEEEEEEE
T ss_conf             12589840222323455467899776532464434320137999614999999999838879999618988899999964