HHsearch results for GI: 254780891 and protein with PDBid: 1h7s_A
>1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A*
Probab=97.38 E-value=0.00063 Score=43.46 Aligned_cols=80 Identities=11% Similarity=0.078 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCC------------CCCCH
Q ss_conf 123444567664687653200111112355772047999878984402458874054545789------------98720
Q gi|254780891|r 114 ERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIVDGNVESTI------------DSHDI 181 (215)
Q Consensus 114 ~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~~~~~~------------~g~Gl 181 (215)
...+++.-|+.||++|. -..|.|.+.. ++.-.|.|.|+|.||+ ++++........+.+. +-.|.
T Consensus 34 ~~~svvkELieNSiDA~--At~I~I~v~~-~g~~~I~V~DnG~Gi~-~~dl~~~~~~~~tsk~~~~~d~~~~~t~GfRGe 109 (365)
T 1h7s_A 34 SLSTAVKELVENSLDAG--ATNIDLKLKD-YGVDLIEVSDNGCGVE-EENFEGLTLKHHTSKIQEFADLTQVETFGFRGE 109 (365)
T ss_dssp CHHHHHHHHHHHHHHTT--CSEEEEEEEG-GGTSEEEEEECSCCCC-GGGSGGGGC----------CCTTCSEEESSSSS
T ss_pred CHHHHHHHHHHHHHCCC--CCEEEEEEEC-CCEEEEEEEECCCCCC-HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 88899999997787289--8889999987-9843899998998759-899864542023677662336533455774227
Q ss_pred HHHHHHHHHHHCCCEEEEEEE
Q ss_conf 499999999970987999987
Q gi|254780891|r 182 QFYYVILLAHENKIRLLPEII 202 (215)
Q Consensus 182 Gl~~~~~i~~~~gG~i~v~~~ 202 (215)
+|+-...+ +++.+.+.
T Consensus 110 aL~si~~~-----s~~~i~S~ 125 (365)
T 1h7s_A 110 ALSSLCAL-----SDVTISTC 125 (365)
T ss_dssp HHHHHHHH-----SEEEEEEE
T ss_pred HHHHHHHH-----CCEEEEEE
T ss_conf 88888862-----45158884