HHsearch results for GI: 254780891 and protein with PDBid: 1th8_A
>1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A*
Probab=99.36 E-value=2.7e-12 Score=96.58 Aligned_cols=93 Identities=11% Similarity=0.007 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHHHH---HHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCC--CCCCCHHHHHHHH
Q ss_conf 123444567664687653---20011111235577204799987898440245887405454578--9987204999999
Q gi|254780891|r 114 ERAKILLNLFMVAHASLP---RGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIVDGNVEST--IDSHDIQFYYVIL 188 (215)
Q Consensus 114 ~~~qvl~NLi~NA~~a~~---~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~~~~~--~~g~GlGl~~~~~ 188 (215)
++..++.+++.||++|.- +++.|.|++..+++.+.|.|+|+|+||+ + ..+.|.|++++. ..++|+||++++.
T Consensus 39 di~lav~E~~~NaI~Ha~~~~~~~~I~i~~~~~~~~l~i~V~D~G~Gi~-~--~~~~~~~~~~~~~~~~~~GlGL~ii~~ 115 (145)
T 1th8_A 39 EIKTVVSEAVTNAIIHGYNNDPNGIVSISVIIEDGVVHLTVRDEGVGIP-D--IEEARQPLFTTKPELERSGMGFTIMEN 115 (145)
T ss_dssp HHHHHHHHHHHHHHHTTSTTCTTSEEEEEEEEETTEEEEEEEECSSCCS-C--HHHHTCCC-------CCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCEEEEEEEECCCCCC-C--HHHCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 9999999999999884348999908999999937899999996478958-5--775378775446799957368999999
Q ss_pred HHHHCCCEEEEEEECCCCEEEEEEE
Q ss_conf 9997098799998779926999994
Q gi|254780891|r 189 LAHENKIRLLPEIIDDHNVVLSALL 213 (215)
Q Consensus 189 i~~~~gG~i~v~~~~~~g~~f~~~l 213 (215)
+ .+++.+++.+++|++|+++-
T Consensus 116 l----~d~i~i~s~~~~Gt~v~l~K 136 (145)
T 1th8_A 116 F----MDEVIVESEVNKGTTVYLKK 136 (145)
T ss_dssp H----SSEEEEEEETTTEEEEEEEE
T ss_pred H----CCEEEEEECCCCCEEEEEEE
T ss_conf 6----99999998399969999998