HHsearch results for GI: 254780891 and protein with PDBid: 1ysr_A
>1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A
Probab=99.92 E-value=2.8e-25 Score=179.06 Aligned_cols=105 Identities=12% Similarity=-0.043 Sum_probs=94.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCC---CCCCCCCHHHHH
Q ss_conf 01000123444567664687653200111112355772047999878984402458874054545---789987204999
Q gi|254780891|r 109 IDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIVDGNVE---STIDSHDIQFYY 185 (215)
Q Consensus 109 ~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~~~---~~~~g~GlGl~~ 185 (215)
..++..+.|++.||+.||++|++. +.|+|++...++.+.|.|+|+|+||+ ++...++|++|+. .+..|+|||||+
T Consensus 41 ~~d~~~l~~vl~NLl~NAiky~~~-~~I~i~~~~~~~~v~i~V~D~G~GI~-~~~~~~iF~~F~r~~~~~~~G~GLGL~i 118 (150)
T 1ysr_A 41 VGLPAGLRLAVDNAIANAVKHGGA-TLVQLSAVSSRAGVEIAIDDNGSGVP-EGERQVVFERFSRGSTASHSGSGLGLAL 118 (150)
T ss_dssp EECHHHHHHHHHHHHHHHHHTTCC-SEEEEEEEEETTEEEEEEEESSSCCC-GGGHHHHHTSCC-----------CCCHH
T ss_pred EECHHHHHHHHHHHHHHHHHHCCC-CEEEEEEEEECCEEEEEEEECCCCCC-HHHHHHHCCCCCCCCCCCCCCCCHHHHH
T ss_conf 989999999999999999974899-78999999809999999998487979-8999985576341799998960779999
Q ss_pred HHHHHHHCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf 999999709879999877992699999419
Q gi|254780891|r 186 VILLAHENKIRLLPEIIDDHNVVLSALLEK 215 (215)
Q Consensus 186 ~~~i~~~~gG~i~v~~~~~~g~~f~~~l~~ 215 (215)
|+.+++.|||+|+++|.+++|++|++.||.
T Consensus 119 ~k~i~~~hgG~i~v~s~~~~Gt~f~i~lP~ 148 (150)
T 1ysr_A 119 VAQQAQLHGGTASLENSPLGGARLVLRLPG 148 (150)
T ss_dssp HHHHHHHTTCEEEEEECTTSSEEEEEEEEC
T ss_pred HHHHHHHCCCEEEEEECCCCEEEEEEEEEC
T ss_conf 999999859989999669981699999984