HHsearch results for GI: 254780891 and protein with PDBid: 2c2a_A
>2c2a_A Sensor histidine kinase; phosphotransfer, PHOQ, selenomethionyl MAD, two-component systems, transferase; HET: ADP; 1.9A {Thermotoga maritima} SCOP: a.30.2.1 d.122.1.3 PDB: 3dge_A*
Probab=100.00 E-value=8e-38 Score=258.77 Aligned_cols=199 Identities=15% Similarity=0.095 Sum_probs=146.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCC------CCHHHHHHHHHHHHHHHHH----HHHHHCCCCCCCCCCCCCCCCH
Q ss_conf 99997745454227999999999996144------3014789888999999998----6311001122320000000001
Q gi|254780891|r 16 ALLCSRICHDIISPIGAIHNSLELLDEVG------IEDEVMQLIRLSSMSAIIR----LKFMRLAFGYTGSVDSLIGLGD 85 (215)
Q Consensus 16 allas~IaHdlrtPL~~I~~~~elL~~~~------~~~~~~~~i~~~~~~~~~l----~~~~r~~~~~~~~~~~~~~~~~ 85 (215)
.-+.+.|||||||||++|.+++++|.+.. ...++++.|...+.++..+ +++.+...+.........++.+
T Consensus 21 ~~f~a~isHELrtPL~~I~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~rl~~li~~lL~~sr~e~~~~~l~~~~~~l~~ 100 (258)
T 2c2a_A 21 TEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCD 100 (258)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTGGGCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCEEEEHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHH
T ss_conf 99999979998589999999999997145569999999999999999999999999999998442799874215876999
Q ss_pred HHH----HHHHHH-HCCCCCCCCCCCC----CCCCCHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCCCCCEEEEEEE
Q ss_conf 344----444322-0122332110000----001000123444567664687653200---1111123557720479998
Q gi|254780891|r 86 IEQ----VIEDFI-AVDKRVQVSWTGE----KIDLSRERAKILLNLFMVAHASLPRGG---KVTISVQDSKNENIFSLKI 153 (215)
Q Consensus 86 ~~~----~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~qvl~NLi~NA~~a~~~gg---~I~i~~~~~~~~~~i~V~D 153 (215)
+.+ .+.... .++..+.++.+.+ ...++..+.|++.||+.||++|++.|| .|.+.+...++.+.|+|+|
T Consensus 101 l~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~D~~~l~qvl~NLl~NAik~t~~g~~~~~i~v~~~~~~~~~~i~V~D 180 (258)
T 2c2a_A 101 LVESAVNAIKEFASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVED 180 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEESSCSCCEEEECHHHHHHHHHHHHHHHHHTCCTTCTTCEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEEEEE
T ss_conf 99999999999999769789997089986699987999999999999999985535898248999996059989999998
Q ss_pred CCCCCCCHHHHHHHHCCCCC------CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf 78984402458874054545------789987204999999999709879999877992699999419
Q gi|254780891|r 154 NGNLARFPEKFTQIVDGNVE------STIDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLEK 215 (215)
Q Consensus 154 ~G~Gi~~~e~~~~~~~~~~~------~~~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~~ 215 (215)
+|+||+ ++...++|+||+. ++..|+|||||+|+.|++.|||+|+++|.+|+|++|+++||+
T Consensus 181 ~G~GI~-~e~~~~iF~~F~r~~~~~~~~~~G~GLGL~i~k~iv~~hgG~I~v~S~~g~Gt~f~i~lP~ 247 (258)
T 2c2a_A 181 NGIGIP-DHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK 247 (258)
T ss_dssp CSSCCC-GGGTTGGGSTTCCCC---------CCCTHHHHHHHHHHTTCEEEEEEETTTEEEEEEEEEC
T ss_pred CCCCCC-HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEC
T ss_conf 289889-8999987459882888888999940489999999999839989999559992699999618