HHsearch alignment for GI: 254780892 and conserved domain: COG0745
>COG0745 OmpR Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].
Probab=99.94 E-value=9.1e-26 Score=173.93 Aligned_cols=118 Identities=25% Similarity=0.349 Sum_probs=110.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEEE
Q ss_conf 7799973998999999999998898999999979999999717999489970789987--73899996143488973999
Q gi|254780892|r 2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVYY 79 (133)
Q Consensus 2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii~ 79 (133)
T Consensus 1 ~~ILiveDd~~i~~~l~~~L~~~G~~v~~~~~~~~a~~~~~~~--~dlviLD~~lP~~dG~~~~~~iR~~-~~~~~PIi~ 77 (229)
T COG0745 1 MRILLVEDDPELAELLKEYLEEEGYEVDVAADGEEALEAAREQ--PDLVLLDLMLPDLDGLELCRRLRAK-KGSGPPIIV 77 (229)
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC--CCEEEEECCCCCCCHHHHHHHHHHC-CCCCCCEEE
T ss_conf 9899991888999999999987597899978989999997269--9999998899985689999999851-689998899
Q ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 9638998999999976998899769898999999999999999
Q gi|254780892|r 80 LLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQK 122 (133)
Q Consensus 80 lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~ 122 (133)
T Consensus 78 Lta~~~~~d~v~gl~~GADDYl~KPf~~~EL~ARi~a~lRR~~ 120 (229)
T COG0745 78 LTARDDEEDRVLGLEAGADDYLTKPFSPRELLARLRALLRRNA 120 (229)
T ss_pred EECCCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 9668728889999975634233488998999999999967365