HHsearch alignment for GI: 254780892 and conserved domain: COG3947

>COG3947 Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms].
Probab=99.70  E-value=9.1e-17  Score=120.29  Aligned_cols=115  Identities=19%  Similarity=0.310  Sum_probs=100.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEEEE
Q ss_conf             799973998999999999998898999999979999999717999489970789987--738999961434889739999
Q gi|254780892|r    3 SLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVYYL   80 (133)
Q Consensus         3 ~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii~l   80 (133)
T Consensus         2 ~~iiVDdd~a~~~~l~~iLs~~~~~~~~~~~~~eal~~Le~-~kpDLifldI~mp~~ngiefaeQvr~i--~~~v~iifI   78 (361)
T COG3947           2 RIIIVDDDAAIVKLLSVILSRAGHEVRSCSHPVEALDLLEV-FKPDLIFLDIVMPYMNGIEFAEQVRDI--ESAVPIIFI   78 (361)
T ss_pred             CEEEECCHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHH-CCCCEEEEEEECCCCCHHHHHHHHHHH--HCCCCEEEE
T ss_conf             27998463899999999998611021006887889999984-388779998523786087899999875--314868999


Q ss_pred             ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf             638998999999976998899769898999999999999999
Q gi|254780892|r   81 LMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQK  122 (133)
Q Consensus        81 T~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~  122 (133)
T Consensus        79 ssh~eya--~dsf~~n~~dYl~KPvt~ekLnraIdr~~k~ve  118 (361)
T COG3947          79 SSHAEYA--DDSFGMNLDDYLPKPVTPEKLNRAIDRRLKRVE  118 (361)
T ss_pred             ECCHHHH--HHHCCCCHHHHCCCCCCHHHHHHHHHHHHCCCC
T ss_conf             6305652--320355667541688888899999998740244