HHsearch alignment for GI: 254780892 and conserved domain: PRK09390

>PRK09390 fixJ response regulator FixJ; Provisional.
Probab=99.92  E-value=6.5e-24  Score=162.89  Aligned_cols=116  Identities=22%  Similarity=0.258  Sum_probs=106.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEEE
Q ss_conf             7799973998999999999998898999999979999999717999489970789987--73899996143488973999
Q gi|254780892|r    2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVYY   79 (133)
Q Consensus         2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii~   79 (133)
T Consensus         4 ~tIliVDDh~~vr~gl~~lL~~~~~~v~~~~~~~~~l~~~~~-~~pdlvllDi~mP~~~G~e~l~~l~~~--~p~~~viv   80 (202)
T PRK09390          4 GVVHVVDDDEAMRDSLAFLLDSAGFEVRLFESAQAFLDALPG-LRFGCVVTDVRMPGIDGIELLRRLKAR--GSPLPVIV   80 (202)
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHC-CCCCEEEECCCCCCCCCHHHHHHHHHC--CCCCCEEE
T ss_conf             979998499999999999999889989998999999999765-797999877999998960799998722--89986799


Q ss_pred             EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf             96389989999999769988997698989999999999999
Q gi|254780892|r   80 LLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQM  120 (133)
Q Consensus        80 lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~  120 (133)
T Consensus        81 lT~~~~~~~~~~al~~GA~gyl~K~~~~~~L~~aI~~~l~~  121 (202)
T PRK09390         81 MTGHGDVPLAVEAMKLGAIDFIEKPFEDERLIGAIERALAQ  121 (202)
T ss_pred             EEECCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf             97457488889999829464455999999999999999971