HHsearch alignment for GI: 254780892 and conserved domain: PRK09468
>PRK09468 ompR osmolarity response regulator; Provisional.
Probab=99.95 E-value=1.8e-26 Score=178.13 Aligned_cols=119 Identities=22% Similarity=0.300 Sum_probs=109.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEEE
Q ss_conf 7799973998999999999998898999999979999999717999489970789987--73899996143488973999
Q gi|254780892|r 2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVYY 79 (133)
Q Consensus 2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii~ 79 (133)
T Consensus 6 ~kILiVEDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~~~~-~~~DlvilDi~lp~~dG~~l~~~iR~~--~~~~pII~ 82 (239)
T PRK09468 6 YKILVVDDDMRLRALLERYLTEQGFQVRSAANAEQMDRLLTR-ESFHLMVLDLMLPGEDGLSICRRLRSQ--NNPTPIIM 82 (239)
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-CCCCEEEECCCCCCCCCCHHHHHHHHH--CCCCCEEE
T ss_conf 789999099999999999999889999998999999999975-899899987899888873467778750--57877899
Q ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHH
Q ss_conf 96389989999999769988997698989999999999999999
Q gi|254780892|r 80 LLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQKS 123 (133)
Q Consensus 80 lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~~ 123 (133)
T Consensus 83 LTa~~~~~d~i~~l~~GADDYi~KPf~~~EL~aRI~allrR~~~ 126 (239)
T PRK09468 83 LTAKGEEVDRIVGLEMGADDYLPKPFNPRELLARIRAVLRRQAP 126 (239)
T ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 94667878999999769868855899989999999999863234