HHsearch alignment for GI: 254780892 and conserved domain: PRK09483
>PRK09483 response regulator; Provisional.
Probab=99.85 E-value=6.2e-20 Score=139.15 Aligned_cols=117 Identities=26% Similarity=0.338 Sum_probs=105.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHC-CCEEE-EECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCE
Q ss_conf 977999739989999999999988-98999-999979999999717999489970789987--73899996143488973
Q gi|254780892|r 1 MDSLLLVDSSHIVRKVGRHLFNDF-GFMVF-EATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVF 76 (133)
Q Consensus 1 m~~ILiVDD~~~~r~~l~~~L~~~-g~~v~-~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~p 76 (133)
T Consensus 1 Mi~VlIvDDh~l~r~gl~~~L~~~~~~~vv~~a~~~~~~l~~~~~-~~pDvvllDl~lp~~~Gl~~~~~i~~~--~p~~~ 77 (216)
T PRK09483 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRT-NAVDVVLMDMNMPGIGGLEATRKILRS--TPDVK 77 (216)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-CCCCEEEECCCCCCCCCHHHHHHHHHH--CCCCC
T ss_conf 958999849999999999999748995899998999999999985-599999986889898752377888740--89985
Q ss_pred EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 99996389989999999769988997698989999999999999
Q gi|254780892|r 77 VYYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQM 120 (133)
Q Consensus 77 ii~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~ 120 (133)
T Consensus 78 vivls~~~~~~~~~~al~~Ga~gyl~K~~~~~~l~~ai~~v~~G 121 (216)
T PRK09483 78 IIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVHSG 121 (216)
T ss_pred EEEECCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
T ss_conf 78630566328899999748878994799999999999999859