HHsearch alignment for GI: 254780892 and conserved domain: PRK10046
>PRK10046 dpiA two-component response regulator DpiA; Provisional.
Probab=99.94 E-value=1.1e-25 Score=173.33 Aligned_cols=121 Identities=19% Similarity=0.334 Sum_probs=108.0
Q ss_pred EEEEECCCHHHHHHHHHHHHH-CCCE-EEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEE
Q ss_conf 799973998999999999998-8989-99999979999999717999489970789987--7389999614348897399
Q gi|254780892|r 3 SLLLVDSSHIVRKVGRHLFND-FGFM-VFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVY 78 (133)
Q Consensus 3 ~ILiVDD~~~~r~~l~~~L~~-~g~~-v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii 78 (133)
T Consensus 6 ~VLIVEDd~~v~~~l~~~L~~~~gf~~V~~A~~~~eA~~~l~~-~~pDLvLLDi~LPd~~Glell~~lr~~--~~~~~VI 82 (225)
T PRK10046 6 TLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARMMIER-FKPGLILLDNYLPDGRGINLLHELVQA--HYPGDVV 82 (225)
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-CCCCEEEEECCCCCCCHHHHHHHHHHH--CCCCCEE
T ss_conf 6999959899999999999728995499998999999999973-599999982898999799999999964--8799889
Q ss_pred EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 996389989999999769988997698989999999999999999999
Q gi|254780892|r 79 YLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQKSKDE 126 (133)
Q Consensus 79 ~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~~~~~ 126 (133)
T Consensus 83 ~iTA~~d~~~~~~Al~~Ga~DYLvKPf~~erl~~~L~~y~~~~~~l~~ 130 (225)
T PRK10046 83 FTTAASDMETVSEAVRCGVFDYLIKPIAYERLGQTLTRFRQRKHMLES 130 (225)
T ss_pred EEECCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 996899999999999749983102899999999999999999998635