HHsearch alignment for GI: 254780892 and conserved domain: PRK10360
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional.
Probab=99.81 E-value=2e-18 Score=130.24 Aligned_cols=114 Identities=22% Similarity=0.146 Sum_probs=100.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHH-HCCCE-EEEECCHHHHHHHHHHCCCCCEEEECCCCCCCC--HHHHHHHHCCCCCCCE
Q ss_conf 9779997399899999999999-88989-999999799999997179994899707899877--3899996143488973
Q gi|254780892|r 1 MDSLLLVDSSHIVRKVGRHLFN-DFGFM-VFEATSVCEAREFCEKELLPNYLVIDESMEGVL--EFIAHVRQMPLGTDVF 76 (133)
Q Consensus 1 m~~ILiVDD~~~~r~~l~~~L~-~~g~~-v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~~--~l~~~ir~~~~~~~~p 76 (133)
T Consensus 1 Mi~I~IvDDh~l~r~gl~~~l~~~~~~~vv~~~~~~~~~l~~~~~-~~~dvvllD~~mp~~~g~~~~~~l~-----~~~~ 74 (196)
T PRK10360 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPG-RGVQVCICDISMPDISGLELLSQLP-----KGMA 74 (196)
T ss_pred CEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHH-CCCCEEEECCCCCCCCCHHHHHHHH-----CCCC
T ss_conf 919999879799999999998129995999998999999998874-4999999878878862077999984-----3874
Q ss_pred EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 99996389989999999769988997698989999999999999
Q gi|254780892|r 77 VYYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQM 120 (133)
Q Consensus 77 ii~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~ 120 (133)
T Consensus 75 vivls~~~~~~~~~~a~~~Ga~g~l~K~~~~~el~~aI~~v~~G 118 (196)
T PRK10360 75 TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 (196)
T ss_pred EEEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
T ss_conf 89997307599999999759988997789999999999999869