HHsearch alignment for GI: 254780892 and conserved domain: PRK10365
>PRK10365 transcriptional regulatory protein ZraR; Provisional.
Probab=99.95 E-value=3e-26 Score=176.77 Aligned_cols=118 Identities=18% Similarity=0.274 Sum_probs=107.8
Q ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCC--HHHHHHHHCCCCCCCEEEEE
Q ss_conf 7999739989999999999988989999999799999997179994899707899877--38999961434889739999
Q gi|254780892|r 3 SLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGVL--EFIAHVRQMPLGTDVFVYYL 80 (133)
Q Consensus 3 ~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~~--~l~~~ir~~~~~~~~pii~l 80 (133)
T Consensus 7 ~ILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~~~al~~l~~~-~~DlvllD~~mp~~~Gl~lL~~l~~~--~p~~pvIvi 83 (441)
T PRK10365 7 DILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ-VFDLVLCDVRMAEMDGIATLKEIKAL--NPAIPVLIM 83 (441)
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC-CCCEEEECCCCCCCCHHHHHHHHHHH--CCCCCEEEE
T ss_conf 599983989999999999997799899989999999998648-99999988999999899999999842--989828999
Q ss_pred ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHH
Q ss_conf 6389989999999769988997698989999999999999999
Q gi|254780892|r 81 LMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQKS 123 (133)
Q Consensus 81 T~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~~ 123 (133)
T Consensus 84 T~~~~~~~av~A~k~GA~Dyl~KP~~~~~L~~~i~~al~~~~~ 126 (441)
T PRK10365 84 TAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHS 126 (441)
T ss_pred ECCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 6999989999999828512340788899999999999999987