HHsearch alignment for GI: 254780892 and conserved domain: PRK10529
>PRK10529 DNA-binding transcriptional activator KdpE; Provisional.
Probab=99.95 E-value=5e-27 Score=181.43 Aligned_cols=118 Identities=25% Similarity=0.380 Sum_probs=108.8
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEE
Q ss_conf 97799973998999999999998898999999979999999717999489970789987--7389999614348897399
Q gi|254780892|r 1 MDSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVY 78 (133)
Q Consensus 1 m~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii 78 (133)
T Consensus 1 M~~ILivEDd~~l~~~l~~~L~~~g~~V~~a~~~~~al~~~~~-~~~DlviLDi~lP~~dG~~l~~~iR~~---~~~pII 76 (225)
T PRK10529 1 MTNVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAAT-RKPDLIILDLGLPDGDGIEFIRDLRQW---SAIPVI 76 (225)
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-CCCCEEEEECCCCCCCCCCCEEEEECC---CCCCEE
T ss_conf 9989999798999999999999889999997999999998611-799899980788888876331000127---998789
Q ss_pred EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 99638998999999976998899769898999999999999999
Q gi|254780892|r 79 YLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQK 122 (133)
Q Consensus 79 ~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~ 122 (133)
T Consensus 77 ~lta~~~~~d~i~~l~~GADDYl~KPf~~~eL~aRi~a~lrr~~ 120 (225)
T PRK10529 77 VLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHS 120 (225)
T ss_pred EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf 99546898999999976987654078545999999999971403