HHsearch alignment for GI: 254780892 and conserved domain: PRK10766
>PRK10766 DNA-binding transcriptional regulator TorR; Provisional.
Probab=99.94 E-value=1.5e-25 Score=172.65 Aligned_cols=118 Identities=22% Similarity=0.302 Sum_probs=108.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEEE
Q ss_conf 7799973998999999999998898999999979999999717999489970789987--73899996143488973999
Q gi|254780892|r 2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVYY 79 (133)
Q Consensus 2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii~ 79 (133)
T Consensus 3 ~kILlVEDD~~l~~~l~~~L~~~g~~V~~~~~~~~a~~~l~~-~~~DlvilDi~lp~~~G~el~~~iR~~---~~~piI~ 78 (224)
T PRK10766 3 YHILVVEDEPVTRARLQGYFEQEGYRVSEAASGAGMREIMQN-QHVDLILLDINLPGEDGLMLTRELRSR---STVGIIL 78 (224)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-CCCCEEEECCCCCCCCCCCHHHHHHHC---CCCCEEE
T ss_conf 719999199999999999999879999998999999999960-899999988999988766137676304---7855686
Q ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHH
Q ss_conf 96389989999999769988997698989999999999999999
Q gi|254780892|r 80 LLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQKS 123 (133)
Q Consensus 80 lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~~ 123 (133)
T Consensus 79 lta~~~~~~~i~al~~GaddYl~KPf~~~eL~ari~allrR~~~ 122 (224)
T PRK10766 79 VTGRTDSIDRIVGLEMGADDYVTKPFELRELLVRVKNLLWRISL 122 (224)
T ss_pred ECCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 33558989999999849414513999889999999999725244