HHsearch alignment for GI: 254780892 and conserved domain: PRK10816
>PRK10816 DNA-binding transcriptional regulator PhoP; Provisional.
Probab=99.93 E-value=2.1e-24 Score=165.83 Aligned_cols=117 Identities=21% Similarity=0.332 Sum_probs=108.1
Q ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEEEE
Q ss_conf 799973998999999999998898999999979999999717999489970789987--738999961434889739999
Q gi|254780892|r 3 SLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVYYL 80 (133)
Q Consensus 3 ~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii~l 80 (133)
T Consensus 2 kILivEdd~~~~~~l~~~L~~~g~~V~~a~~~~~al~~~~~~-~~dlvilD~~lp~~~G~~l~~~ir~~--~~~~piI~l 78 (223)
T PRK10816 2 RVLVVEDNALLRHHLKVQLQDAGHQVDAAEDAKEADYYLNEH-LPDIAIVDLGLPDEDGLSLIRRWRSN--DVSLPILVL 78 (223)
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC-CCCEEEEECCCCCCCCCCCCCCHHCC--CCCCCEEEE
T ss_conf 899995989999999999997899999989999999999757-99899997999898864001201104--898768999
Q ss_pred ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 638998999999976998899769898999999999999999
Q gi|254780892|r 81 LMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQK 122 (133)
Q Consensus 81 T~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~ 122 (133)
T Consensus 79 ta~~~~~~~~~al~~Gaddyl~KP~~~~eL~arv~~~lrr~~ 120 (223)
T PRK10816 79 TARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRRNS 120 (223)
T ss_pred ECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCC
T ss_conf 444567789999986998864189777899999999966555