HHsearch alignment for GI: 254780892 and conserved domain: PRK10841
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional.
Probab=99.95 E-value=5.4e-27 Score=181.23 Aligned_cols=118 Identities=19% Similarity=0.234 Sum_probs=108.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCC--HHHHHHHHCCCCCCCEEEE
Q ss_conf 77999739989999999999988989999999799999997179994899707899877--3899996143488973999
Q gi|254780892|r 2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGVL--EFIAHVRQMPLGTDVFVYY 79 (133)
Q Consensus 2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~~--~l~~~ir~~~~~~~~pii~ 79 (133)
T Consensus 825 lrILVVEDNpINq~VL~~~L~~LG~~V~~A~NG~EALe~l~~~-~fDLILMDIqMPvMDGyEaTr~IRe~--~~~iPIIA 901 (947)
T PRK10841 825 MMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKN-HIDIVLSDVNMPNMDGYRLTQRIRQL--GLTLPVIG 901 (947)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC-CCCEEEECCCCCCCCHHHHHHHHHCC--CCCCEEEE
T ss_conf 8899990789999999999997699999989999999997569-98989970888998099999999808--98494999
Q ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 9638998999999976998899769898999999999999999
Q gi|254780892|r 80 LLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQK 122 (133)
Q Consensus 80 lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~ 122 (133)
T Consensus 902 LTAnA~~edkerCleAGMDdyLsKPV~l~~L~~vL~~Y~~~~r 944 (947)
T PRK10841 902 VTANALAEEKQRCLEAGMDSCLSKPVTLDVLKQTLTVYAERVR 944 (947)
T ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 9389998999999987999999798979999999999987764