HHsearch alignment for GI: 254780892 and conserved domain: PRK11083

>PRK11083 DNA-binding response regulator CreB; Provisional.
Probab=99.95  E-value=3.1e-26  Score=176.75  Aligned_cols=118  Identities=19%  Similarity=0.290  Sum_probs=109.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEEE
Q ss_conf             7799973998999999999998898999999979999999717999489970789987--73899996143488973999
Q gi|254780892|r    2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVYY   79 (133)
Q Consensus         2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii~   79 (133)
T Consensus         4 ~kILiVEDd~~l~~~l~~~L~~~g~~v~~~~~~~~al~~~~~-~~~DlvilDi~LP~~~G~~l~~~iR~~--~~~~pII~   80 (229)
T PRK11083          4 PTILLVEDEQAIADTLVYALQSEGFTVEWFERGLPALDKLRQ-QPPDLVILDVGLPDISGFELCRQLRAF--HPALPVIF   80 (229)
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-CCCCEEEECCCCCCCCHHHHHHHHHHH--CCCCEEEE
T ss_conf             999999699999999999999889999998999999999971-899899973889998768899999970--89972999


Q ss_pred             EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf             9638998999999976998899769898999999999999999
Q gi|254780892|r   80 LLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQK  122 (133)
Q Consensus        80 lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~  122 (133)
T Consensus        81 lta~~~~~d~i~~l~~GADDYl~KPf~~~EL~aRi~a~lrR~~  123 (229)
T PRK11083         81 LTARSDEVDRLVGLEIGADDYVAKPFSPREVAARVRTILRRVK  123 (229)
T ss_pred             EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf             8367898999999975998773087428999999999997643