HHsearch alignment for GI: 254780892 and conserved domain: PRK11091
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional.
Probab=99.94 E-value=1.2e-25 Score=173.23 Aligned_cols=117 Identities=18% Similarity=0.135 Sum_probs=104.3
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCC--HHHHHHHHCCCCC-CCEEE
Q ss_conf 77999739989999999999988989999999799999997179994899707899877--3899996143488-97399
Q gi|254780892|r 2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGVL--EFIAHVRQMPLGT-DVFVY 78 (133)
Q Consensus 2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~~--~l~~~ir~~~~~~-~~pii 78 (133)
T Consensus 526 lrILvVEDn~iN~~V~~~~L~~lG~~v~~A~nG~eALe~~~~~~-fDLILMDiqMP~MDG~Eatr~IR~~~~~~~~~PII 604 (779)
T PRK11091 526 LNILLVEDIELNVIVARSLLEKLGNSVDVAMTGKDALEMFKPGE-YDLVLLDIQLPDMTGLDVARELRERYGREDLPPLV 604 (779)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCC-CCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEE
T ss_conf 81899868899999999999975999999899999999850699-99899828999997899999998425768999279
Q ss_pred EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 996389989999999769988997698989999999999999
Q gi|254780892|r 79 YLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQM 120 (133)
Q Consensus 79 ~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~ 120 (133)
T Consensus 605 ALTAna~~-d~~~~l~aGMdd~L~KPi~~~~L~~~l~~~~~~ 645 (779)
T PRK11091 605 ALTANVLK-DKQEYLDAGMDDVLSKPLSVPALTAMIKKFWDT 645 (779)
T ss_pred EEECCCCH-HHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCC
T ss_conf 88187417-699999769984751889899999999998464