HHsearch alignment for GI: 254780892 and conserved domain: PRK12555

Probab=99.85  E-value=6.3e-20  Score=139.12  Aligned_cols=100  Identities=21%  Similarity=0.229  Sum_probs=86.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHC-CCEEE-EECCHHHHHHHHHHCCCCCEEEECCCCCCCC--HHHHHHHHCCCCCCCEE
Q ss_conf             77999739989999999999988-98999-9999799999997179994899707899877--38999961434889739
Q gi|254780892|r    2 DSLLLVDSSHIVRKVGRHLFNDF-GFMVF-EATSVCEAREFCEKELLPNYLVIDESMEGVL--EFIAHVRQMPLGTDVFV   77 (133)
Q Consensus         2 ~~ILiVDD~~~~r~~l~~~L~~~-g~~v~-~a~~g~eAl~~~~~~~~pdlii~D~~mP~~~--~l~~~ir~~~~~~~~pi   77 (133)
T Consensus         2 irVLIVDDs~~~R~~l~~~L~~~~~~eVv~~A~~g~eAl~~~~~-~~pDvVllDi~MP~mdGie~l~~I~~~--~-p~PV   77 (340)
T PRK12555          2 MNVGIVDDSALAREALRRIIARRPDHRVLGVATDGLQARDLCKA-QPPDVVLLDLEMPRMDGLTFLRRIMRR--R-PCPV   77 (340)
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HCCCEEEEECCCCCCCHHHHHHHHHHH--C-CCCE
T ss_conf             88999909889999999999609994899998999999999886-199999972788999879999999987--8-9986


Q ss_pred             EEEECCC--CHHHHHHHHHCCCCEEEECCC
Q ss_conf             9996389--989999999769988997698
Q gi|254780892|r   78 YYLLMEV--DFEKMIAGARAGANSFLLKPF  105 (133)
Q Consensus        78 i~lT~~~--~~~~~~~a~~~Ga~~yl~KP~  105 (133)
T Consensus        78 imvSs~~~~~~~~~~~AL~~GA~D~i~KP~  107 (340)
T PRK12555         78 LIVSSLTEAGASITYEALGAGALDAVDKPK  107 (340)
T ss_pred             EEEEECCCCCHHHHHHHHHCCHHHEEECCC
T ss_conf             998503565769999999779776684788