HHsearch alignment for GI: 254780892 and conserved domain: TIGR01497
>TIGR01497 kdpB K+-transporting ATPase, B subunit; InterPro: IPR006391 These sequences describe the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In Escherichia coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit . The function of KdpC is unclear, although it has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex . The potassium P-type ATPases have been characterised as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB) . Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics . ; GO: 0008556 potassium-transporting ATPase activity, 0006813 potassium ion transport, 0016021 integral to membrane.
Probab=90.77 E-value=1.4 Score=23.88 Aligned_cols=82 Identities=12% Similarity=0.157 Sum_probs=53.6
Q ss_pred CCHHHHHHHH-HHCCCCCEEEECCCC------CCC--CHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEE
Q ss_conf 9979999999-717999489970789------987--7389999614348897399996389989999999769988997
Q gi|254780892|r 32 TSVCEAREFC-EKELLPNYLVIDESM------EGV--LEFIAHVRQMPLGTDVFVYYLLMEVDFEKMIAGARAGANSFLL 102 (133)
Q Consensus 32 ~~g~eAl~~~-~~~~~pdlii~D~~m------P~~--~~l~~~ir~~~~~~~~pii~lT~~~~~~~~~~a~~~Ga~~yl~ 102 (133)
T Consensus 412 ~dlD~av~qVa~~GgTPLvVc~dn~iyGVIyLKDiVK~Gi~ERF~q-LR~~GikTiM~TGDNrlTAa~IA~EAGVDdFiA 490 (675)
T TIGR01497 412 KDLDEAVDQVAKQGGTPLVVCVDNKIYGVIYLKDIVKSGIKERFEQ-LRKMGIKTIMLTGDNRLTAAVIAKEAGVDDFIA 490 (675)
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCEEEEEEEEECCCCCCHHHHHHH-HHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCC
T ss_conf 3767889998732898479997577898898730137860457888-722586689972897578999997628885201
Q ss_pred CCCCHHHHHHHHH
Q ss_conf 6989899999999
Q gi|254780892|r 103 KPFNRETLRFAMR 115 (133)
Q Consensus 103 KP~~~~~L~~~i~ 115 (133)
T Consensus 491 Ea-~PEdKi~~I~ 502 (675)
T TIGR01497 491 EA-TPEDKIEVIK 502 (675)
T ss_pred CC-CCHHHHHHHH
T ss_conf 58-8367899998