HHsearch results for GI: 254780892 and protein with PDBid: 1i3c_A
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=99.95 E-value=2.6e-26 Score=175.91 Aligned_cols=119 Identities=18% Similarity=0.219 Sum_probs=109.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCC--EEEEECCHHHHHHHHHHC------CCCCEEEECCCCCCC--CHHHHHHHHCCC
Q ss_conf 7799973998999999999998898--999999979999999717------999489970789987--738999961434
Q gi|254780892|r 2 DSLLLVDSSHIVRKVGRHLFNDFGF--MVFEATSVCEAREFCEKE------LLPNYLVIDESMEGV--LEFIAHVRQMPL 71 (133)
Q Consensus 2 ~~ILiVDD~~~~r~~l~~~L~~~g~--~v~~a~~g~eAl~~~~~~------~~pdlii~D~~mP~~--~~l~~~ir~~~~ 71 (133)
++|||||||+..|+.++..|+..|+ ++.+|.||.+|++.+++. ..||+||+|++||++ +++++++|+++.
T Consensus 9 ~~ILiVdD~~~~~~~l~~~L~~~g~~~~v~~~~~g~eAl~~l~~~~~~~~~~~pdlillD~~mP~~~G~el~~~ir~~~~ 88 (149)
T 1i3c_A 9 KVILLVEDSKADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQNPD 88 (149)
T ss_dssp EEEEEECCCHHHHHHHHHHHHSCCSCEEEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHHCTT
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCC
T ss_conf 98999979999999999999976998479998999999999985002212689888998489999864999999985804
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 8897399996389989999999769988997698989999999999999
Q gi|254780892|r 72 GTDVFVYYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQM 120 (133)
Q Consensus 72 ~~~~pii~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~ 120 (133)
++++|||++|++++.+...+|+++||++|+.||++.++|..+++++.+.
T Consensus 89 ~~~iPvI~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~i~~~ 137 (149)
T 1i3c_A 89 LKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRNLKDLFKMVQGIESF 137 (149)
T ss_dssp TTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 4799889995689999999999879989997989999999999999998