HHsearch results for GI: 254780892 and protein with PDBid: 1i3c_A

>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=99.95  E-value=2.6e-26  Score=175.91  Aligned_cols=119  Identities=18%  Similarity=0.219  Sum_probs=109.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCC--EEEEECCHHHHHHHHHHC------CCCCEEEECCCCCCC--CHHHHHHHHCCC
Q ss_conf             7799973998999999999998898--999999979999999717------999489970789987--738999961434
Q gi|254780892|r    2 DSLLLVDSSHIVRKVGRHLFNDFGF--MVFEATSVCEAREFCEKE------LLPNYLVIDESMEGV--LEFIAHVRQMPL   71 (133)
Q Consensus         2 ~~ILiVDD~~~~r~~l~~~L~~~g~--~v~~a~~g~eAl~~~~~~------~~pdlii~D~~mP~~--~~l~~~ir~~~~   71 (133)
                      ++|||||||+..|+.++..|+..|+  ++.+|.||.+|++.+++.      ..||+||+|++||++  +++++++|+++.
T Consensus         9 ~~ILiVdD~~~~~~~l~~~L~~~g~~~~v~~~~~g~eAl~~l~~~~~~~~~~~pdlillD~~mP~~~G~el~~~ir~~~~   88 (149)
T 1i3c_A            9 KVILLVEDSKADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQNPD   88 (149)
T ss_dssp             EEEEEECCCHHHHHHHHHHHHSCCSCEEEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHHCTT
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCC
T ss_conf             98999979999999999999976998479998999999999985002212689888998489999864999999985804


Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf             8897399996389989999999769988997698989999999999999
Q gi|254780892|r   72 GTDVFVYYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQM  120 (133)
Q Consensus        72 ~~~~pii~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~  120 (133)
                      ++++|||++|++++.+...+|+++||++|+.||++.++|..+++++.+.
T Consensus        89 ~~~iPvI~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~i~~~  137 (149)
T 1i3c_A           89 LKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRNLKDLFKMVQGIESF  137 (149)
T ss_dssp             TTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf             4799889995689999999999879989997989999999999999998