HHsearch results for GI: 254780892 and protein with PDBid: 1qo0_D
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=99.89 E-value=2.1e-22 Score=152.60 Aligned_cols=113 Identities=9% Similarity=-0.033 Sum_probs=97.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCEEEEEE
Q ss_conf 77999739989999999999988989999999799999997179994899707899877389999614348897399996
Q gi|254780892|r 2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGVLEFIAHVRQMPLGTDVFVYYLL 81 (133)
Q Consensus 2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~~~l~~~ir~~~~~~~~pii~lT 81 (133)
.|||||||++.+|..+...|+.+||+|..+.+|.+|+. ..||+|++|+.||++.+... .+.....+.+|||++|
T Consensus 13 l~vLvvdd~~~~~~~l~~~L~~~G~~v~~~~~~~~al~-----~~~D~vl~D~~mp~~~~~~~-~~~~~~~~~~pvI~lt 86 (196)
T 1qo0_D 13 LQVLVLNPPGEVSDALVLQLIRIGCSVRQCWPPPEAFD-----VPVDVVFTSIFQNRHHDEIA-ALLAAGTPRTTLVALV 86 (196)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHHTCEEEEECSCCSSCS-----SCCSEEEEECCSSTHHHHHH-HHHHHSCTTCEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEECCCCHHHHCC-----CCCCEEEEECCCCCCCHHHH-HHHHHCCCCCCEEEEE
T ss_conf 86999957999999999999986998871699799848-----89998998489999859999-9998649999889984
Q ss_pred CCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 389989999999769988997698989999999999999
Q gi|254780892|r 82 MEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQM 120 (133)
Q Consensus 82 ~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~ 120 (133)
++++.+...+++++|+++|+.|||++++|..++..+...
T Consensus 87 ~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 87 EYESPAVLSQIIELECHGVITQPLDAHRVLPVLVSARRI 125 (196)
T ss_dssp CCCSHHHHHHHHHHTCSEEEESSCCGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHH
T ss_conf 579999999999859998655999989999999999999