HHsearch results for GI: 254780892 and protein with PDBid: 2hqr_A
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, symmetric dimer, signaling protein; NMR {Helicobacter pylori J99}
Probab=99.84 E-value=2.5e-20 Score=140.19 Aligned_cols=110 Identities=15% Similarity=0.246 Sum_probs=95.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEE
Q ss_conf 97799973998999999999998898999999979999999717999489970789987--7389999614348897399
Q gi|254780892|r 1 MDSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVY 78 (133)
Q Consensus 1 m~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii 78 (133)
|| ||+||||+..+..++..|+..||+|..|.+|.+|++.+.. ..||+|+ ||++ +++++++|+. .+.+|||
T Consensus 1 Mr-ILiVeDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~~~~-~~~Dlvi----lp~~~G~~l~~~ir~~--~~~~pIi 72 (223)
T 2hqr_A 1 MR-VLLIEKNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDI-RNYDLVM----VSDKNALSFVSRIKEK--HSSIVVL 72 (223)
T ss_dssp CC-EEEECSCHHHHHHHHHHHGGGTCCEEEESSHHHHHHHHTT-SCCSEEE----ECCTTHHHHHHHHHHH--CTTSEEE
T ss_pred CE-EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHC-CCCCEEE----ECCCCHHHHHHHHHHC--CCCCEEE
T ss_conf 98-9999389999999999999879999998999999999845-8999999----5898899999998764--8983299
Q ss_pred EEECCCCHHHHHHHHHCCCCEEEECCCCH-HHHHHHHHHHH
Q ss_conf 99638998999999976998899769898-99999999999
Q gi|254780892|r 79 YLLMEVDFEKMIAGARAGANSFLLKPFNR-ETLRFAMRELP 118 (133)
Q Consensus 79 ~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~-~~L~~~i~~~~ 118 (133)
++|+.++.+...+++++||+||+.|||+. ++|..+++...
T Consensus 73 ~lt~~~~~~~~~~~l~~Gaddyl~KP~~~~~~l~~~~~~~~ 113 (223)
T 2hqr_A 73 VSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARL 113 (223)
T ss_dssp EEESSCCHHHHHHHHHHTCSEEEETTCSCTHHHHHHHHHHT
T ss_pred EECCCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHH
T ss_conf 82366758999998753997078724220256899999997