HHsearch results for GI: 254780892 and protein with PDBid: 2qsj_A

>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=99.93  E-value=2.8e-25  Score=169.70  Aligned_cols=118  Identities=22%  Similarity=0.347  Sum_probs=108.3

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHC--CCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCE
Q ss_conf             977999739989999999999988--98999999979999999717999489970789987--73899996143488973
Q gi|254780892|r    1 MDSLLLVDSSHIVRKVGRHLFNDF--GFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVF   76 (133)
Q Consensus         1 m~~ILiVDD~~~~r~~l~~~L~~~--g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~p   76 (133)
                      |.+||||||++.+|..++.+|+..  |+.|.+|.++.+|++.+.++..||+||+|++|||+  .++++++|+.  .+.+|
T Consensus         3 ~~~VLIvDD~~~~r~~l~~~L~~~~~~~~v~~a~~~~eal~~l~~~~~~DlvllD~~mP~~~G~e~l~~ir~~--~p~~~   80 (154)
T 2qsj_A            3 LTVVLIVDDHHLIRAGAKNLLEGAFSGMRVEGAETVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRF--DPSNA   80 (154)
T ss_dssp             CEEEEEECSCHHHHHHHHHHHHHHCTTEEEEEESSHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHH--CTTSE
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHH--CCCCC
T ss_conf             9999999499999999999997289984999966899999999745999789980888998889999999987--88997


Q ss_pred             EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf             99996389989999999769988997698989999999999999
Q gi|254780892|r   77 VYYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQM  120 (133)
Q Consensus        77 ii~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~  120 (133)
                      ||++|++++.+...+|+++||++|+.||++.++|..+|+++.+.
T Consensus        81 iivlT~~~~~~~~~~a~~~Ga~gyl~K~~~~~~L~~aI~~v~~g  124 (154)
T 2qsj_A           81 VALISGETDHELIRAALEAGADGFIPKSADPQVLIHAVSLILEG  124 (154)
T ss_dssp             EEEC-----CHHHHHHHHTTCCBBCCTTSCHHHHHHHHHHHHTT
T ss_pred             EEEEEEECCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
T ss_conf             99998028999999999859988997999999999999999879