HHsearch results for GI: 254780892 and protein with PDBid: 2qsj_A
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=99.93 E-value=2.8e-25 Score=169.70 Aligned_cols=118 Identities=22% Similarity=0.347 Sum_probs=108.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHC--CCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCE
Q ss_conf 977999739989999999999988--98999999979999999717999489970789987--73899996143488973
Q gi|254780892|r 1 MDSLLLVDSSHIVRKVGRHLFNDF--GFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVF 76 (133)
Q Consensus 1 m~~ILiVDD~~~~r~~l~~~L~~~--g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~p 76 (133)
|.+||||||++.+|..++.+|+.. |+.|.+|.++.+|++.+.++..||+||+|++|||+ .++++++|+. .+.+|
T Consensus 3 ~~~VLIvDD~~~~r~~l~~~L~~~~~~~~v~~a~~~~eal~~l~~~~~~DlvllD~~mP~~~G~e~l~~ir~~--~p~~~ 80 (154)
T 2qsj_A 3 LTVVLIVDDHHLIRAGAKNLLEGAFSGMRVEGAETVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRF--DPSNA 80 (154)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHHCTTEEEEEESSHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHH--CTTSE
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHH--CCCCC
T ss_conf 9999999499999999999997289984999966899999999745999789980888998889999999987--88997
Q ss_pred EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 99996389989999999769988997698989999999999999
Q gi|254780892|r 77 VYYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQM 120 (133)
Q Consensus 77 ii~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~ 120 (133)
||++|++++.+...+|+++||++|+.||++.++|..+|+++.+.
T Consensus 81 iivlT~~~~~~~~~~a~~~Ga~gyl~K~~~~~~L~~aI~~v~~g 124 (154)
T 2qsj_A 81 VALISGETDHELIRAALEAGADGFIPKSADPQVLIHAVSLILEG 124 (154)
T ss_dssp EEEC-----CHHHHHHHHTTCCBBCCTTSCHHHHHHHHHHHHTT
T ss_pred EEEEEEECCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
T ss_conf 99998028999999999859988997999999999999999879