HHsearch results for GI: 254780892 and protein with PDBid: 3ilh_A
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein structure initiative, structural genomics; 2.59A {Cytophaga hutchinsonii atcc 33406}
Probab=99.91 E-value=2.3e-23 Score=158.31 Aligned_cols=121 Identities=21% Similarity=0.256 Sum_probs=105.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHCCC--EEEEECCHHHHHHHHHH----CCCCCEEEECCCCCCC--CHHHHHHHHC--C
Q ss_conf 97799973998999999999998898--99999997999999971----7999489970789987--7389999614--3
Q gi|254780892|r 1 MDSLLLVDSSHIVRKVGRHLFNDFGF--MVFEATSVCEAREFCEK----ELLPNYLVIDESMEGV--LEFIAHVRQM--P 70 (133)
Q Consensus 1 m~~ILiVDD~~~~r~~l~~~L~~~g~--~v~~a~~g~eAl~~~~~----~~~pdlii~D~~mP~~--~~l~~~ir~~--~ 70 (133)
+++|||||||+.++..++..|+..|+ +|.+|.||++|++.+++ +..||+|++||+||++ .++++++|+. +
T Consensus 9 ~~~ILiVDDd~~~~~~l~~~l~~~g~~~~v~~a~~g~~Al~~l~~~~~~~~~pdliilD~~MP~~dG~el~~~ir~~~~~ 88 (146)
T 3ilh_A 9 IDSVLLIDDDDIVNFLNTTIIRMTHRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQP 88 (146)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGG
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCC
T ss_conf 99799997989999999999997799818999899999999998631027899999984898999759999999860851
Q ss_pred CCCCCEEEEEECCCCHHHHHHHHH-CCCCEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 488973999963899899999997-699889976989899999999999999
Q gi|254780892|r 71 LGTDVFVYYLLMEVDFEKMIAGAR-AGANSFLLKPFNRETLRFAMRELPQMQ 121 (133)
Q Consensus 71 ~~~~~pii~lT~~~~~~~~~~a~~-~Ga~~yl~KP~~~~~L~~~i~~~~~~~ 121 (133)
....+|+|++|+..+.....++.. .|+++|+.||++.+.|..++++++++-
T Consensus 89 ~~~~~~viilts~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~l~~~l~~g 140 (146)
T 3ilh_A 89 MKNKSIVCLLSSSLDPRDQAKAEASDWVDYYVSKPLTANALNNLYNKVLNEG 140 (146)
T ss_dssp GTTTCEEEEECSSCCHHHHHHHHHCSSCCEEECSSCCHHHHHHHHHHHHCC-
T ss_pred CCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCC
T ss_conf 2488719999788998999999997799889979899999999999999714