HHsearch results for GI: 254780892 and protein with PDBid: 3luf_A
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=99.65 E-value=7.8e-16 Score=113.43 Aligned_cols=106 Identities=15% Similarity=0.140 Sum_probs=87.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEEE
Q ss_conf 7799973998999999999998898999999979999999717999489970789987--73899996143488973999
Q gi|254780892|r 2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVYY 79 (133)
Q Consensus 2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii~ 79 (133)
+||||||||+..|+.+...|...|+.+..+.++.+|+..+. +..||+|++|++|||+ .++++.++. .++|+++
T Consensus 5 ~rILvVdD~~~~~~~l~~~L~~~~~~~v~~~~~~ea~~~~~-~~~~dlillD~~mP~~~g~e~~~~l~~----~~~pvi~ 79 (259)
T 3luf_A 5 QKILIVEDSMTIRRMLIQAIAQQTGLEIDAFDTLEGARHCQ-GDEYVVALVDLTLPDAPSGEAVKVLLE----RGLPVVI 79 (259)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHHHCCEEEEESSTGGGTTCC-TTTEEEEEEESCBTTBTTSHHHHHHHH----TTCCEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHC-CCCCCEEEEECCCCCCCHHHHHHHHHH----CCCCCCC
T ss_conf 87999979999999999999975998999938699999965-899988999788875402357898764----0387423
Q ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHH
Q ss_conf 963899899999997699889976989899999
Q gi|254780892|r 80 LLMEVDFEKMIAGARAGANSFLLKPFNRETLRF 112 (133)
Q Consensus 80 lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~ 112 (133)
+|+.........++.+|+.+|+.||.....+..
T Consensus 80 ~t~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 112 (259)
T 3luf_A 80 LTADISEDKREAWLEAGVLDYVMKDSRHSLQYA 112 (259)
T ss_dssp EECC-CHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHH
T ss_conf 467545788999997488644454321000027