RPSBLAST alignment of GI: 254780892 and protein with PDBid: 2qzj

>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics, protein structure initiative; 2.89A {Clostridium difficile 630} Length = 136

 Score = 50.9 bits (121), Expect = 9e-08
 Identities = 19/125 (15%), Positives = 48/125 (38%), Gaps = 2/125 (1%)

Query: 4   LLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGVLEFI 63
           +L++D      +  +    + G  +  A +  EA            L+  E +    +  
Sbjct: 7   ILIIDGDKDNCQKLKGFLEEKGISIDLAYNCEEAIGKIFSNKYD--LIFLEIILSDGDGW 64

Query: 64  AHVRQMPLGTDVFVYYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQKS 123
              +++   T   + Y+    + + ++    +G + +L+KP N E L   ++ + +   S
Sbjct: 65  TLCKKIRNVTTCPIVYMTYINEDQSILNALNSGGDDYLIKPLNLEILYAKVKAILRRMNS 124

Query: 124 KDENQ 128
              N+
Sbjct: 125 YVNNE 129