RPSBLAST alignment of GI: 254780892 and protein with PDBid: 3cu5

>3cu5_A Two component transcriptional regulator, ARAC family; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg} Length = 141

 Score = 51.1 bits (122), Expect = 8e-08
 Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 12/132 (9%)

Query: 4   LLLVDSSHIVRKVGRHLFNDFGFMV---FEATSVCEAREFCEKELLPNYLVIDESMEGV- 59
           +L+VD   + R       N          +A     A +   K   PN L+ D  M  + 
Sbjct: 5   ILIVDDEKLTRDGLIANINWKALSFDQIDQADDGINAIQIALKHP-PNVLLTDVRMPRMD 63

Query: 60  -LEFIAHVRQMPLGTDVFVYYLLMEVDFEKMIAGARAGANSFLLKPFNRETL----RFAM 114
            +E + ++ +  L  D  V ++    D E + A  +  A  ++ KP +   +    + ++
Sbjct: 64  GIELVDNILK--LYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEIMDALKQSI 121

Query: 115 RELPQMQKSKDE 126
           + + Q Q  +D 
Sbjct: 122 QTVLQHQAQQDS 133