HHsearch alignment for GI: 254780893 and conserved domain: COG3437

>COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms].
Probab=99.87  E-value=6.3e-23  Score=158.43  Aligned_cols=117  Identities=31%  Similarity=0.569  Sum_probs=110.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC---CCCEEC
Q ss_conf             95999869989999999999988989999999899999998579947883114987433431112222322---331001
Q gi|254780893|r    1 MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKI---STPVCI   77 (236)
Q Consensus         1 mkILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~---~~pII~   77 (236)
T Consensus        15 ~~vl~vDD~~~~~~~~~~lL~~~~y~v~~ae~g~~a~kl~~~~~~dlvllD~~mp~mdg~ev~~~lk~~~p~t~~ip~i~   94 (360)
T COG3437          15 LTVLLVDDEPDNLEALRQLLRMIGYRVIEAENGEEALKLLQEEPPDLVLLDVRMPEMDGAEVLNKLKAMSPSTRRIPVIL   94 (360)
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEE
T ss_conf             14889658666899999999742641464147507788751168856776425777659999999872497656532599


Q ss_pred             CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             3332100000112322101112233222111112222222
Q gi|254780893|r   78 LSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVR  117 (236)
Q Consensus        78 ls~~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llr  117 (236)
T Consensus        95 lT~~~d~~~~~~~~~~g~~dyl~KP~~~~~l~~rv~~~~q  134 (360)
T COG3437          95 LTAYADSEDRQRALEAGADDYLSKPISPKELVARVSSHLQ  134 (360)
T ss_pred             EEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf             8605876999999972477775288988999999999999