HHsearch alignment for GI: 254780893 and conserved domain: PRK09581
>PRK09581 pleD response regulator PleD; Reviewed.
Probab=99.13 E-value=7.3e-11 Score=85.80 Aligned_cols=116 Identities=31% Similarity=0.485 Sum_probs=101.7
Q ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC--CCCCEECCC
Q ss_conf 599986998999999999998898999999989999999857994788311498743343111222232--233100133
Q gi|254780893|r 2 RILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAK--ISTPVCILS 79 (236)
Q Consensus 2 kILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~--~~~pII~ls 79 (236)
T Consensus 157 ~il~v~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~l~~~~~~~~d~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~i~~~~ 235 (457)
T PRK09581 157 RILLVDDDVSQAERIANILKEE-FRVDVLSDPEEALIRAAEGNYDLIIVSASFENYDPLRLCSQLRSKERTRYVPILLLV 235 (457)
T ss_pred EEEEECCCHHHHHHHHHHHHHH-CCEEEECCHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEE
T ss_conf 1999879679999999997533-246885486999987435797689975656766468999999714343573299995
Q ss_pred CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 321000001123221011122332221111122222222
Q gi|254780893|r 80 GMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRR 118 (236)
Q Consensus 80 ~~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr 118 (236)
T Consensus 236 ~~~~~~~~~~~~~~g~~d~~~~~~~~~e~~~r~~~~~~~ 274 (457)
T PRK09581 236 DEDEDPRLVKALELGVNDYLMRPIDKNELLARVRTQIRR 274 (457)
T ss_pred CCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 688616676664146522884378627555879999998