HHsearch alignment for GI: 254780893 and conserved domain: PRK10610
>PRK10610 chemotaxis regulatory protein CheY; Provisional.
Probab=99.95 E-value=4.8e-28 Score=189.21 Aligned_cols=119 Identities=24% Similarity=0.450 Sum_probs=113.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCC-EEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC--CCCCEEC
Q ss_conf 9599986998999999999998898-999999989999999857994788311498743343111222232--2331001
Q gi|254780893|r 1 MRILLIEDDKALAHSIELMLKSENF-NVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAK--ISTPVCI 77 (236)
Q Consensus 1 mkILivedd~~~~~~l~~~L~~~g~-~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~--~~~pII~ 77 (236)
T Consensus 6 lrILivDD~~~~r~~l~~~L~~~g~~~v~~a~~g~~al~~~~~~~~Dlil~D~~MP~~dG~el~~~ir~~~~~~~~Pii~ 85 (129)
T PRK10610 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFVISDWNMPNMDGLELLKTIRADGAMSALPVLM 85 (129)
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEE
T ss_conf 89999979899999999999986997899989999999999858999999818999998999999998577778996899
Q ss_pred CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 333210000011232210111223322211111222222222
Q gi|254780893|r 78 LSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRS 119 (236)
Q Consensus 78 ls~~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr~ 119 (236)
T Consensus 86 ~T~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~vl~r~ 127 (129)
T PRK10610 86 VTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKL 127 (129)
T ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 988689999999998699889989899999999999999763