HHsearch alignment for GI: 254780893 and conserved domain: PRK10651

>PRK10651 transcriptional regulator NarL; Provisional.
Probab=99.97  E-value=8.3e-31  Score=205.87  Aligned_cols=191  Identities=26%  Similarity=0.400  Sum_probs=155.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHC-CCEEE-EECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECC
Q ss_conf             95999869989999999999988-98999-99998999999985799478831149874334311122223223310013
Q gi|254780893|r    1 MRILLIEDDKALAHSIELMLKSE-NFNVY-VTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKISTPVCIL   78 (236)
Q Consensus         1 mkILivedd~~~~~~l~~~L~~~-g~~v~-~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~~~pII~l   78 (236)
T Consensus         7 irVlIvDDh~l~r~gl~~~L~~~~~~~vv~~a~~~~ea~~~~~~~~pDlvllDl~lp~~~G~~~~~~l~~~~~~~~iivl   86 (216)
T PRK10651          7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVF   86 (216)
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf             78999839999999999999758993899998999999999870799999995999998887642323345788746763


Q ss_pred             CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             332100000112322101112233222111112222222222222222222222222-2222223333322246411688
Q gi|254780893|r   79 SGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRGHAQSLIVTGDLSVN-LDAKTVEVQGHRIHLTGKEYQM  157 (236)
Q Consensus        79 s~~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr~~~~~~~~~~~g~~~~d-~~~~~v~~~g~~i~LT~~E~~l  157 (236)
T Consensus        87 t~~~~~~~~~~al~~Ga~gyl~K~~~~~~L~~ai~~v~~g~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~LT~RE~eV  163 (216)
T PRK10651         87 SVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALT---PVLAASLRANRATTERDVNQLTPRERDI  163 (216)
T ss_pred             ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHH---HHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf             0554188999999669878983789999999999999859971698899---9999875226665444423489899999


Q ss_pred             HHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             9998718997378999999871887777753036678999885110
Q gi|254780893|r  158 IELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSN  203 (236)
Q Consensus       158 L~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~  203 (236)
T Consensus       164 L~ll~~--G--~snkeIA~~L-----~iS~~TV~~h~~~i~~KLgv  200 (216)
T PRK10651        164 LKLIAQ--G--LSNKMIARRL-----DITESTVKVHVKHMLKKMKL  200 (216)
T ss_pred             HHHHHC--C--CCHHHHHHHH-----CCCHHHHHHHHHHHHHHHCC
T ss_conf             999985--9--9999999996-----97899999999999998489