HHsearch alignment for GI: 254780893 and conserved domain: PRK10651
>PRK10651 transcriptional regulator NarL; Provisional.
Probab=99.97 E-value=8.3e-31 Score=205.87 Aligned_cols=191 Identities=26% Similarity=0.400 Sum_probs=155.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHHC-CCEEE-EECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECC
Q ss_conf 95999869989999999999988-98999-99998999999985799478831149874334311122223223310013
Q gi|254780893|r 1 MRILLIEDDKALAHSIELMLKSE-NFNVY-VTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKISTPVCIL 78 (236)
Q Consensus 1 mkILivedd~~~~~~l~~~L~~~-g~~v~-~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~~~pII~l 78 (236)
T Consensus 7 irVlIvDDh~l~r~gl~~~L~~~~~~~vv~~a~~~~ea~~~~~~~~pDlvllDl~lp~~~G~~~~~~l~~~~~~~~iivl 86 (216)
T PRK10651 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVF 86 (216)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 78999839999999999999758993899998999999999870799999995999998887642323345788746763
Q ss_pred CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 332100000112322101112233222111112222222222222222222222222-2222223333322246411688
Q gi|254780893|r 79 SGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRGHAQSLIVTGDLSVN-LDAKTVEVQGHRIHLTGKEYQM 157 (236)
Q Consensus 79 s~~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr~~~~~~~~~~~g~~~~d-~~~~~v~~~g~~i~LT~~E~~l 157 (236)
T Consensus 87 t~~~~~~~~~~al~~Ga~gyl~K~~~~~~L~~ai~~v~~g~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~LT~RE~eV 163 (216)
T PRK10651 87 SVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALT---PVLAASLRANRATTERDVNQLTPRERDI 163 (216)
T ss_pred ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHH---HHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf 0554188999999669878983789999999999999859971698899---9999875226665444423489899999
Q ss_pred HHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9998718997378999999871887777753036678999885110
Q gi|254780893|r 158 IELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSN 203 (236)
Q Consensus 158 L~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~ 203 (236)
T Consensus 164 L~ll~~--G--~snkeIA~~L-----~iS~~TV~~h~~~i~~KLgv 200 (216)
T PRK10651 164 LKLIAQ--G--LSNKMIARRL-----DITESTVKVHVKHMLKKMKL 200 (216)
T ss_pred HHHHHC--C--CCHHHHHHHH-----CCCHHHHHHHHHHHHHHHCC
T ss_conf 999985--9--9999999996-----97899999999999998489