HHsearch alignment for GI: 254780893 and conserved domain: PRK11083
>PRK11083 DNA-binding response regulator CreB; Provisional.
Probab=100.00 E-value=0 Score=419.29 Aligned_cols=223 Identities=31% Similarity=0.515 Sum_probs=212.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf 95999869989999999999988989999999899999998579947883114987433431112222322331001333
Q gi|254780893|r 1 MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKISTPVCILSG 80 (236)
Q Consensus 1 mkILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~~~pII~ls~ 80 (236)
T Consensus 4 ~kILiVEDd~~l~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~DlvilDi~LP~~~G~~l~~~iR~~~~~~pII~lta 83 (229)
T PRK11083 4 PTILLVEDEQAIADTLVYALQSEGFTVEWFERGLPALDKLRQQPPDLVILDVGLPDISGFELCRQLRAFHPALPVIFLTA 83 (229)
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 99999969999999999999988999999899999999997189989997388999876889999997089972999836
Q ss_pred CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 2100000112322101112233222111112222222222222---2222222222222222223333322246411688
Q gi|254780893|r 81 MSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRGHA---QSLIVTGDLSVNLDAKTVEVQGHRIHLTGKEYQM 157 (236)
Q Consensus 81 ~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr~~~~~---~~~~~~g~~~~d~~~~~v~~~g~~i~LT~~E~~l 157 (236)
T Consensus 84 ~~~~~d~i~~l~~GADDYl~KPf~~~EL~aRi~a~lrR~~~~~~~~~~~~~~~~~~ld~~~~~v~~~g~~i~LT~~E~~L 163 (229)
T PRK11083 84 RSDEVDRLVGLEIGADDYVAKPFSPREVAARVRTILRRVKKFAAPSPVIRIAGHFELDEPGARISYFGTPLSLTRYEFLL 163 (229)
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEECCCCEEEECCEECCCCHHHHHH
T ss_conf 78989999999759987730874289999999999976435677776325647889987861999999954599999999
Q ss_pred HHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECC
Q ss_conf 999871899737899999987188777775303667899988511067888438888782026456
Q gi|254780893|r 158 IELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGRGYVLRE 223 (236)
Q Consensus 158 L~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~~~~~~~I~tvrG~GY~l~~ 223 (236)
T Consensus 164 L~~L~~~~g~vvsr~~L~~~vw~~~~~~~~rtidv~I~rLR~KL~~~~~~~~~I~TvrG~GY~l~P 229 (229)
T PRK11083 164 LKTLLLSPGRVFSRQQLMDIVWEDAQDSYDRTVDTHIKTLRAKLRAINPDLSPIRTHRGLGYSLRP 229 (229)
T ss_pred HHHHHHCCCCEECHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECC
T ss_conf 999986799409699999985599888884669999999999875268999859997896569739