HHsearch alignment for GI: 254780893 and conserved domain: PRK11091
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional.
Probab=99.90 E-value=2.4e-24 Score=166.98 Aligned_cols=116 Identities=32% Similarity=0.433 Sum_probs=105.3
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC---CCCCEEC
Q ss_conf 9599986998999999999998898999999989999999857994788311498743343111222232---2331001
Q gi|254780893|r 1 MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAK---ISTPVCI 77 (236)
Q Consensus 1 mkILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~---~~~pII~ 77 (236)
T Consensus 526 lrILvVEDn~iN~~V~~~~L~~lG~~v~~A~nG~eALe~~~~~~fDLILMDiqMP~MDG~Eatr~IR~~~~~~~~~PIIA 605 (779)
T PRK11091 526 LNILLVEDIELNVIVARSLLEKLGNSVDVAMTGKDALEMFKPGEYDLVLLDIQLPDMTGLDVARELRERYGREDLPPLVA 605 (779)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEE
T ss_conf 81899868899999999999975999999899999999850699998998289999978999999984257689992798
Q ss_pred CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3332100000112322101112233222111112222222
Q gi|254780893|r 78 LSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVR 117 (236)
Q Consensus 78 ls~~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llr 117 (236)
T Consensus 606 LTAna~-~d~~~~l~aGMdd~L~KPi~~~~L~~~l~~~~~ 644 (779)
T PRK11091 606 LTANVL-KDKQEYLDAGMDDVLSKPLSVPALTAMIKKFWD 644 (779)
T ss_pred EECCCC-HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHC
T ss_conf 818741-769999976998475188989999999999846