HHsearch alignment for GI: 254780893 and conserved domain: PRK11173
>PRK11173 two-component response regulator; Provisional.
Probab=100.00 E-value=0 Score=399.33 Aligned_cols=223 Identities=22% Similarity=0.434 Sum_probs=208.8
Q ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
Q ss_conf 59998699899999999999889899999998999999985799478831149874334311122223223310013332
Q gi|254780893|r 2 RILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKISTPVCILSGM 81 (236)
Q Consensus 2 kILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~~~pII~ls~~ 81 (236)
T Consensus 5 ~ILiVEDD~~~~~~l~~~L~~~G~~V~~a~~~~ea~~~l~~~~~DlvilDi~lp~~~G~~l~~~iR~~~-~~piI~lta~ 83 (237)
T PRK11173 5 HILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSENDINLVIMDINLPGKNGLLLARELREQA-NVALMFLTGR 83 (237)
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCC-CCCEEEEECC
T ss_conf 899995989999999999998899999989999999998638998999938999887303555665168-8478999432
Q ss_pred CCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCC
Q ss_conf 10000011232210111223322211111222222222222--------2222222222222222222-33333222464
Q gi|254780893|r 82 SSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRGH--------AQSLIVTGDLSVNLDAKTV-EVQGHRIHLTG 152 (236)
Q Consensus 82 ~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr~~~~--------~~~~~~~g~~~~d~~~~~v-~~~g~~i~LT~ 152 (236)
T Consensus 84 ~~~~~~i~~l~~GaddYi~KPf~~~EL~arv~~~l~r~~~~~~~~~~~~~~~~~~~~~~~ld~~~~~l~~~~g~~i~Lt~ 163 (237)
T PRK11173 84 DNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLISPDGEQYKLPR 163 (237)
T ss_pred CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCEEEECCCEEEECCH
T ss_conf 57788999997697678878988799999999998664135665333466543898889997268479971997997699
Q ss_pred CHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCC
Q ss_conf 1168899987189973789999998718877777530366789998851106788843888878202645688
Q gi|254780893|r 153 KEYQMIELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGRGYVLRENA 225 (236)
Q Consensus 153 ~E~~lL~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~~~~~~~I~tvrG~GY~l~~~~ 225 (236)
T Consensus 164 ~E~~lL~~L~~~~~~vvsR~~L~~~vwg~~~~~~~r~ld~~I~rLRkKl~~~~~~~~~I~TvrG~GYrf~~~~ 236 (237)
T PRK11173 164 SEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDL 236 (237)
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCCC
T ss_conf 9999999998679987689999999619887888586999999999976527999981997878177978006