HHsearch alignment for GI: 254780893 and conserved domain: PRK12370
>PRK12370 invasion protein regulator; Provisional.
Probab=99.70 E-value=3.8e-17 Score=123.66 Aligned_cols=102 Identities=23% Similarity=0.408 Sum_probs=89.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 22222222222222222223333322246411688999871899737899999987188777775303667899988511
Q gi|254780893|r 123 AQSLIVTGDLSVNLDAKTVEVQGHRIHLTGKEYQMIELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLS 202 (236)
Q Consensus 123 ~~~~~~~g~~~~d~~~~~v~~~g~~i~LT~~E~~lL~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~ 202 (236)
T Consensus 10 ~n~qy~F~dFvLd~d-r~L~r~~~~v~I~Pqvf~lL~lLvenrdrvVSKdELi~~VW~griVSEs-tLtsrI~a~RkaLg 87 (553)
T PRK12370 10 SNKKFVFDDFILNMD-GSLLRSEKKVNIPPKEYAVLVILLEAAGEIVSKNTLLDQVWGDAEVNEE-SLTRCIYALRRILS 87 (553)
T ss_pred CCCEEEECCEEECCC-HHEEECCCEECCCHHHHHHHHHHHHCCCCEECHHHHHHHHCCCCEECHH-HHHHHHHHHHHHHC
T ss_conf 554010145356540-2200059641348479999999984767537499999983599620388-99999999999858
Q ss_pred HCCCCCCEEEEECCCEEEECCCCCC
Q ss_conf 0678884388887820264568875
Q gi|254780893|r 203 NAAGGKNYIETVWGRGYVLRENAKD 227 (236)
Q Consensus 203 ~~~~~~~~I~tvrG~GY~l~~~~~~ 227 (236)
T Consensus 88 D~-~eqr~IrTv~gkGyRF~~~V~~ 111 (553)
T PRK12370 88 ED-KEHRYIETLYGQGYRFNRPVVV 111 (553)
T ss_pred CC-CCCEEEEHHCCCCEEECCCCCC
T ss_conf 75-4450244103784242564021