HHsearch alignment for GI: 254780893 and conserved domain: PRK13856

>PRK13856 two-component response regulator VirG; Provisional.
Probab=100.00  E-value=0  Score=384.80  Aligned_cols=228  Identities=28%  Similarity=0.418  Sum_probs=208.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCC-
Q ss_conf             5999869989999999999988989999999899999998579947883114987433431112222322331001333-
Q gi|254780893|r    2 RILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKISTPVCILSG-   80 (236)
Q Consensus         2 kILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~~~pII~ls~-   80 (236)
T Consensus         3 ~ILlVEDD~~l~~~l~~~L~~~g~~v~~a~~~~~~~~~l~~~~~DlvIlDi~lp~~~Gl~~~~~ir~~~-~~piiilt~~   81 (241)
T PRK13856          3 HVLVIDDDVAMRHLIVEYLTIHAFKVTAVADSQQFNRVLSSETVDVVVVDLNLGREDGLEIVRSLATKS-DVPIIIISGD   81 (241)
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCC-CCCEEEEECC
T ss_conf             899996989999999999987799999989999999998659999999969998766134555640369-9736999726


Q ss_pred             CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHH
Q ss_conf             210000011232210111223322211111222222222222----2222222222222222222-33333222464116
Q gi|254780893|r   81 MSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRGH----AQSLIVTGDLSVNLDAKTV-EVQGHRIHLTGKEY  155 (236)
Q Consensus        81 ~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr~~~~----~~~~~~~g~~~~d~~~~~v-~~~g~~i~LT~~E~  155 (236)
T Consensus        82 ~~~~~d~i~~l~~GADDYl~KPf~~~EL~aRi~~~lrr~~~~~~~~~~~~~~~~~~~ld~~~~~l~~~~~~~v~LT~~E~  161 (241)
T PRK13856         82 RLEEADKVVALELGATDFIAKPFGTREFLARIRVALRVRPNVVRTKDRRSFCFADWTLNLRQRRLISEAGGEVKLTAGEF  161 (241)
T ss_pred             CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEECCCCEEEEECCEEEECCHHHH
T ss_conf             78789999998769988997776777999999999874546567776744998999997578789997996986788999


Q ss_pred             HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCC
Q ss_conf             88999871899737899999987188777775303667899988511067888438888782026456887545566
Q gi|254780893|r  156 QMIELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGRGYVLRENAKDETCEY  232 (236)
Q Consensus       156 ~lL~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~~~~~~~I~tvrG~GY~l~~~~~~e~~~~  232 (236)
T Consensus       162 ~lL~~L~~~~~~vvsRe~L~~~~~~~~~~~~~r~id~~I~rLRkKL~~~~~~~~~I~TvrG~GY~f~~~~~~--~~~  236 (241)
T PRK13856        162 NLLVAFLEKPRDVLSREQLLIASRVREEEVYDRSIDVLILRLRRKLEQDPANPQLIKTARGAGYFFDADVDV--SYG  236 (241)
T ss_pred             HHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCC--CCC
T ss_conf             999999876994381999999844567788868699999999997313889998099773715498232463--346