HHsearch alignment for GI: 254780893 and conserved domain: TIGR02154

>TIGR02154 PhoB phosphate regulon transcriptional regulatory protein PhoB; InterPro: IPR011879 PhoB is a DNA-binding response regulator protein acting with PhoR in a 2-component system responding to phosphate ion. PhoB acts as a positive regulator of gene expression for phosphate-related genes such as phoA, phoS, phoE and ugpAB as well as itself . It is often found proximal to genes for the high-affinity phosphate ABC transporter (pstSCAB; GenProp0190) and presumably regulates these as well.; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0006817 phosphate transport.
Probab=100.00  E-value=0  Score=484.46  Aligned_cols=220  Identities=32%  Similarity=0.551  Sum_probs=211.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC--CCCEECCC
Q ss_conf             5999869989999999999988989999999899999998579947883114987433431112222322--33100133
Q gi|254780893|r    2 RILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKI--STPVCILS   79 (236)
Q Consensus         2 kILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~--~~pII~ls   79 (236)
T Consensus         4 ~iLvVEDE~AirEl~~~~L~~~gy~v~~A~d~~~A~~~~~E~~PDLILLDWMLPG~SGIel~R~Lr~~~~Tr~iPIIMLT   83 (226)
T TIGR02154         4 RILVVEDEPAIRELIAYNLEKAGYDVVEAGDGDEALTLINERLPDLILLDWMLPGTSGIELARRLRREPETRAIPIIMLT   83 (226)
T ss_pred             EEEEEECCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCEEEEE
T ss_conf             25677082689999999841689469980797999999860799889961478997569999873476331488817740


Q ss_pred             CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             3210000011232210111223322211111222222222222-222222222222222222233333222464116889
Q gi|254780893|r   80 GMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRGH-AQSLIVTGDLSVNLDAKTVEVQGHRIHLTGKEYQMI  158 (236)
Q Consensus        80 ~~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr~~~~-~~~~~~~g~~~~d~~~~~v~~~g~~i~LT~~E~~lL  158 (236)
T Consensus        84 ARGeE~Drv~GLetGADDYvtKPFSp~EL~ARikAVLRR~~P~~~~~~i~~~~l~lD~~~HRV~~~~~~~~lGPTEfRLL  163 (226)
T TIGR02154        84 ARGEEEDRVRGLETGADDYVTKPFSPRELLARIKAVLRRIRPELSDEVIEVGDLELDPVAHRVKRGGQPLELGPTEFRLL  163 (226)
T ss_pred             CCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHCCEEEECCEEECCCCCEEEECCEECCCCCHHHHHH
T ss_conf             55560001131136887503678865889999999983167124202011034777510240431360214687047889


Q ss_pred             HHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEC
Q ss_conf             9987189973789999998718877777530366789998851106788843888878202645
Q gi|254780893|r  159 ELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGRGYVLR  222 (236)
Q Consensus       159 ~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~~~~~~~I~tvrG~GY~l~  222 (236)
T Consensus       164 ~FFM~HPeRV~SReQLLD~VWG~dvyVE~RTVDVHIRRLRKaL~~-~g~~~~vqTVRGaGYrfs  226 (226)
T TIGR02154       164 HFFMTHPERVYSREQLLDRVWGRDVYVEERTVDVHIRRLRKALEP-GGLEDLVQTVRGAGYRFS  226 (226)
T ss_pred             HHHHHCCCCEEEHHHHHHHHCCCCEEEECCCEEEEECCHHHHCCC-CCCCCCEEEECCCCCCCC
T ss_conf             998623773440423201105894325135000322000542387-888871565104662589