HHsearch alignment for GI: 254780893 and conserved domain: TIGR02154
>TIGR02154 PhoB phosphate regulon transcriptional regulatory protein PhoB; InterPro: IPR011879 PhoB is a DNA-binding response regulator protein acting with PhoR in a 2-component system responding to phosphate ion. PhoB acts as a positive regulator of gene expression for phosphate-related genes such as phoA, phoS, phoE and ugpAB as well as itself . It is often found proximal to genes for the high-affinity phosphate ABC transporter (pstSCAB; GenProp0190) and presumably regulates these as well.; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0006817 phosphate transport.
Probab=100.00 E-value=0 Score=484.46 Aligned_cols=220 Identities=32% Similarity=0.551 Sum_probs=211.4
Q ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC--CCCEECCC
Q ss_conf 5999869989999999999988989999999899999998579947883114987433431112222322--33100133
Q gi|254780893|r 2 RILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKI--STPVCILS 79 (236)
Q Consensus 2 kILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~--~~pII~ls 79 (236)
T Consensus 4 ~iLvVEDE~AirEl~~~~L~~~gy~v~~A~d~~~A~~~~~E~~PDLILLDWMLPG~SGIel~R~Lr~~~~Tr~iPIIMLT 83 (226)
T TIGR02154 4 RILVVEDEPAIRELIAYNLEKAGYDVVEAGDGDEALTLINERLPDLILLDWMLPGTSGIELARRLRREPETRAIPIIMLT 83 (226)
T ss_pred EEEEEECCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCEEEEE
T ss_conf 25677082689999999841689469980797999999860799889961478997569999873476331488817740
Q ss_pred CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 3210000011232210111223322211111222222222222-222222222222222222233333222464116889
Q gi|254780893|r 80 GMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRGH-AQSLIVTGDLSVNLDAKTVEVQGHRIHLTGKEYQMI 158 (236)
Q Consensus 80 ~~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr~~~~-~~~~~~~g~~~~d~~~~~v~~~g~~i~LT~~E~~lL 158 (236)
T Consensus 84 ARGeE~Drv~GLetGADDYvtKPFSp~EL~ARikAVLRR~~P~~~~~~i~~~~l~lD~~~HRV~~~~~~~~lGPTEfRLL 163 (226)
T TIGR02154 84 ARGEEEDRVRGLETGADDYVTKPFSPRELLARIKAVLRRIRPELSDEVIEVGDLELDPVAHRVKRGGQPLELGPTEFRLL 163 (226)
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHCCEEEECCEEECCCCCEEEECCEECCCCCHHHHHH
T ss_conf 55560001131136887503678865889999999983167124202011034777510240431360214687047889
Q ss_pred HHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEC
Q ss_conf 9987189973789999998718877777530366789998851106788843888878202645
Q gi|254780893|r 159 ELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGRGYVLR 222 (236)
Q Consensus 159 ~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~~~~~~~I~tvrG~GY~l~ 222 (236)
T Consensus 164 ~FFM~HPeRV~SReQLLD~VWG~dvyVE~RTVDVHIRRLRKaL~~-~g~~~~vqTVRGaGYrfs 226 (226)
T TIGR02154 164 HFFMTHPERVYSREQLLDRVWGRDVYVEERTVDVHIRRLRKALEP-GGLEDLVQTVRGAGYRFS 226 (226)
T ss_pred HHHHHCCCCEEEHHHHHHHHCCCCEEEECCCEEEEECCHHHHCCC-CCCCCCEEEECCCCCCCC
T ss_conf 998623773440423201105894325135000322000542387-888871565104662589